Protein–RNA interactions for Protein: Q6DIC0

Smarca2, Probable global transcription activator SNF2L2, mousemouse

Predictions only

Length 1,577 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2Q6DIC0 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Smarca2Q6DIC0 Ighv5-11-201ENSMUST00000193354 371 ntBASIC21.78■■□□□ 1.08
Smarca2Q6DIC0 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Smarca2Q6DIC0 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC21.78■■□□□ 1.08
Smarca2Q6DIC0 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Smarca2Q6DIC0 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smarca2Q6DIC0 AC126257.1-201ENSMUST00000213195 1536 ntBASIC21.77■■□□□ 1.08
Smarca2Q6DIC0 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smarca2Q6DIC0 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smarca2Q6DIC0 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC21.77■■□□□ 1.08
Smarca2Q6DIC0 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Smarca2Q6DIC0 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smarca2Q6DIC0 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smarca2Q6DIC0 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Smarca2Q6DIC0 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smarca2Q6DIC0 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smarca2Q6DIC0 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC21.77■■□□□ 1.08
Smarca2Q6DIC0 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smarca2Q6DIC0 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smarca2Q6DIC0 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smarca2Q6DIC0 Gm13916-201ENSMUST00000117368 628 ntBASIC21.77■■□□□ 1.08
Smarca2Q6DIC0 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC21.77■■□□□ 1.08
Smarca2Q6DIC0 Gm22877-201ENSMUST00000175451 105 ntBASIC21.77■■□□□ 1.08
Smarca2Q6DIC0 Gm28686-201ENSMUST00000187404 609 ntBASIC21.77■■□□□ 1.08
Smarca2Q6DIC0 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC21.77■■□□□ 1.08
Smarca2Q6DIC0 Gm38117-201ENSMUST00000194653 939 ntBASIC21.77■■□□□ 1.08
Smarca2Q6DIC0 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Smarca2Q6DIC0 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smarca2Q6DIC0 CT025553.1-201ENSMUST00000226292 299 ntBASIC21.77■■□□□ 1.08
Smarca2Q6DIC0 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Smarca2Q6DIC0 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smarca2Q6DIC0 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smarca2Q6DIC0 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Smarca2Q6DIC0 Gm7278-201ENSMUST00000119836 1401 ntBASIC21.77■■□□□ 1.07
Smarca2Q6DIC0 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Smarca2Q6DIC0 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Smarca2Q6DIC0 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
Smarca2Q6DIC0 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smarca2Q6DIC0 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC21.76■■□□□ 1.07
Smarca2Q6DIC0 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smarca2Q6DIC0 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
Smarca2Q6DIC0 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smarca2Q6DIC0 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Smarca2Q6DIC0 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC21.76■■□□□ 1.07
Smarca2Q6DIC0 Ighv2-1-201ENSMUST00000170946 353 ntBASIC21.76■■□□□ 1.07
Smarca2Q6DIC0 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC21.76■■□□□ 1.07
Smarca2Q6DIC0 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC21.76■■□□□ 1.07
Smarca2Q6DIC0 Gm45706-201ENSMUST00000213063 2136 ntBASIC21.76■■□□□ 1.07
Smarca2Q6DIC0 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Smarca2Q6DIC0 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Smarca2Q6DIC0 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC21.76■■□□□ 1.07
Smarca2Q6DIC0 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smarca2Q6DIC0 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Smarca2Q6DIC0 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smarca2Q6DIC0 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Smarca2Q6DIC0 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smarca2Q6DIC0 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Smarca2Q6DIC0 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smarca2Q6DIC0 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smarca2Q6DIC0 Gm15725-201ENSMUST00000119947 1090 ntBASIC21.75■■□□□ 1.07
Smarca2Q6DIC0 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC21.75■■□□□ 1.07
Smarca2Q6DIC0 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Smarca2Q6DIC0 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC21.75■■□□□ 1.07
Smarca2Q6DIC0 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC21.75■■□□□ 1.07
Smarca2Q6DIC0 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC21.75■■□□□ 1.07
Smarca2Q6DIC0 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Smarca2Q6DIC0 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smarca2Q6DIC0 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Smarca2Q6DIC0 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smarca2Q6DIC0 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC21.75■■□□□ 1.07
Smarca2Q6DIC0 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smarca2Q6DIC0 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smarca2Q6DIC0 Gm37691-201ENSMUST00000192147 2573 ntBASIC21.75■■□□□ 1.07
Smarca2Q6DIC0 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smarca2Q6DIC0 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Smarca2Q6DIC0 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smarca2Q6DIC0 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Smarca2Q6DIC0 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarca2Q6DIC0 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarca2Q6DIC0 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarca2Q6DIC0 Gm13910-201ENSMUST00000121752 1428 ntBASIC21.74■■□□□ 1.07
Smarca2Q6DIC0 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarca2Q6DIC0 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC21.74■■□□□ 1.07
Smarca2Q6DIC0 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarca2Q6DIC0 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC21.74■■□□□ 1.07
Smarca2Q6DIC0 Gm12407-201ENSMUST00000180219 324 ntBASIC21.74■■□□□ 1.07
Smarca2Q6DIC0 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Smarca2Q6DIC0 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Smarca2Q6DIC0 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Smarca2Q6DIC0 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarca2Q6DIC0 Gm25201-201ENSMUST00000083093 170 ntBASIC21.74■■□□□ 1.07
Smarca2Q6DIC0 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarca2Q6DIC0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarca2Q6DIC0 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Smarca2Q6DIC0 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Smarca2Q6DIC0 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarca2Q6DIC0 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarca2Q6DIC0 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarca2Q6DIC0 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC21.74■■□□□ 1.07
Smarca2Q6DIC0 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms