Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
AtmQ62388 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
AtmQ62388 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
AtmQ62388 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
AtmQ62388 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
AtmQ62388 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
AtmQ62388 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
AtmQ62388 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC11.75□□□□□ -0.53
AtmQ62388 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
AtmQ62388 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.75□□□□□ -0.53
AtmQ62388 Gm5298-201ENSMUST00000201122 892 ntBASIC11.75□□□□□ -0.53
AtmQ62388 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC11.75□□□□□ -0.53
AtmQ62388 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
AtmQ62388 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
AtmQ62388 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
AtmQ62388 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.75□□□□□ -0.53
AtmQ62388 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
AtmQ62388 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
AtmQ62388 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
AtmQ62388 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.75□□□□□ -0.53
AtmQ62388 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC11.75□□□□□ -0.53
AtmQ62388 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
AtmQ62388 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
AtmQ62388 Gm12857-201ENSMUST00000117678 592 ntBASIC11.75□□□□□ -0.53
AtmQ62388 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.75□□□□□ -0.53
AtmQ62388 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
AtmQ62388 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC11.75□□□□□ -0.53
AtmQ62388 Gm8531-201ENSMUST00000188319 893 ntBASIC11.75□□□□□ -0.53
AtmQ62388 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
AtmQ62388 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
AtmQ62388 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
AtmQ62388 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
AtmQ62388 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.75□□□□□ -0.53
AtmQ62388 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
AtmQ62388 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
AtmQ62388 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC11.75□□□□□ -0.53
AtmQ62388 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
AtmQ62388 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
AtmQ62388 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
AtmQ62388 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC11.75□□□□□ -0.53
AtmQ62388 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
AtmQ62388 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
AtmQ62388 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
AtmQ62388 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC11.75□□□□□ -0.53
AtmQ62388 Gm8723-201ENSMUST00000166076 820 ntBASIC11.75□□□□□ -0.53
AtmQ62388 Gm8701-201ENSMUST00000169259 874 ntBASIC11.75□□□□□ -0.53
AtmQ62388 Gm7985-201ENSMUST00000183329 981 ntBASIC11.75□□□□□ -0.53
AtmQ62388 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
AtmQ62388 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
AtmQ62388 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.75□□□□□ -0.53
AtmQ62388 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.75□□□□□ -0.53
AtmQ62388 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
AtmQ62388 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
AtmQ62388 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
AtmQ62388 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
AtmQ62388 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
AtmQ62388 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
AtmQ62388 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
AtmQ62388 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
AtmQ62388 Gm23675-201ENSMUST00000157311 125 ntBASIC11.74□□□□□ -0.53
AtmQ62388 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
AtmQ62388 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
AtmQ62388 Gm6905-201ENSMUST00000205729 511 ntBASIC11.74□□□□□ -0.53
AtmQ62388 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
AtmQ62388 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
AtmQ62388 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
AtmQ62388 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
AtmQ62388 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.74□□□□□ -0.53
AtmQ62388 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
AtmQ62388 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
AtmQ62388 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
AtmQ62388 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
AtmQ62388 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
AtmQ62388 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
AtmQ62388 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
AtmQ62388 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
AtmQ62388 Gm13019-201ENSMUST00000120000 276 ntBASIC11.74□□□□□ -0.53
AtmQ62388 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.74□□□□□ -0.53
AtmQ62388 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
AtmQ62388 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.74□□□□□ -0.53
AtmQ62388 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
AtmQ62388 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
AtmQ62388 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
AtmQ62388 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
AtmQ62388 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.74□□□□□ -0.53
AtmQ62388 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
AtmQ62388 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
AtmQ62388 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
AtmQ62388 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.74□□□□□ -0.53
AtmQ62388 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
AtmQ62388 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
AtmQ62388 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
AtmQ62388 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
AtmQ62388 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
AtmQ62388 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
AtmQ62388 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
AtmQ62388 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
AtmQ62388 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
AtmQ62388 Gm14213-201ENSMUST00000119778 768 ntBASIC11.73□□□□□ -0.53
AtmQ62388 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms