Protein–RNA interactions for Protein: Q62280

Ss18, Protein SSXT, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18Q62280 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ss18Q62280 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ss18Q62280 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Ss18Q62280 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ss18Q62280 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ss18Q62280 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ss18Q62280 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ss18Q62280 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ss18Q62280 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ss18Q62280 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ss18Q62280 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Ss18Q62280 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ss18Q62280 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ss18Q62280 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ss18Q62280 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ss18Q62280 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ss18Q62280 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Ss18Q62280 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ss18Q62280 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ss18Q62280 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ss18Q62280 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC9.42□□□□□ -0.9
Ss18Q62280 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ss18Q62280 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ss18Q62280 Ldb3-207ENSMUST00000227819 1499 ntBASIC9.42□□□□□ -0.9
Ss18Q62280 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ss18Q62280 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ss18Q62280 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ss18Q62280 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ss18Q62280 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ss18Q62280 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ss18Q62280 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ss18Q62280 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC9.42□□□□□ -0.9
Ss18Q62280 Gm15321-201ENSMUST00000121290 288 ntBASIC9.42□□□□□ -0.9
Ss18Q62280 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC9.42□□□□□ -0.9
Ss18Q62280 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC9.42□□□□□ -0.9
Ss18Q62280 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC9.42□□□□□ -0.9
Ss18Q62280 Gm18307-201ENSMUST00000206864 949 ntBASIC9.42□□□□□ -0.9
Ss18Q62280 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC9.42□□□□□ -0.9
Ss18Q62280 Gm7730-201ENSMUST00000212486 454 ntBASIC9.42□□□□□ -0.9
Ss18Q62280 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC9.42□□□□□ -0.9
Ss18Q62280 AC125206.2-201ENSMUST00000217454 574 ntBASIC9.42□□□□□ -0.9
Ss18Q62280 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ss18Q62280 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ss18Q62280 Gm5626-201ENSMUST00000222151 1058 ntBASIC9.42□□□□□ -0.9
Ss18Q62280 AC154687.2-201ENSMUST00000223853 640 ntBASIC9.42□□□□□ -0.9
Ss18Q62280 AC134335.2-201ENSMUST00000227660 440 ntBASIC9.42□□□□□ -0.9
Ss18Q62280 AC154276.1-201ENSMUST00000228874 1299 ntBASIC9.42□□□□□ -0.9
Ss18Q62280 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
Ss18Q62280 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ss18Q62280 Nudt18-202ENSMUST00000228554 3619 ntBASIC9.42□□□□□ -0.9
Ss18Q62280 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC9.42□□□□□ -0.9
Ss18Q62280 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC9.42□□□□□ -0.9
Ss18Q62280 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ss18Q62280 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ss18Q62280 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
Ss18Q62280 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC9.42□□□□□ -0.9
Ss18Q62280 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ss18Q62280 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ss18Q62280 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ss18Q62280 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ss18Q62280 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ss18Q62280 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ss18Q62280 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ss18Q62280 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ss18Q62280 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ss18Q62280 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ss18Q62280 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ss18Q62280 Gm19817-201ENSMUST00000199764 2132 ntBASIC9.41□□□□□ -0.9
Ss18Q62280 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ss18Q62280 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC9.41□□□□□ -0.9
Ss18Q62280 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ss18Q62280 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ss18Q62280 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ss18Q62280 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Ss18Q62280 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC9.41□□□□□ -0.9
Ss18Q62280 AC096628.2-201ENSMUST00000225443 1413 ntBASIC9.41□□□□□ -0.9
Ss18Q62280 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ss18Q62280 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ss18Q62280 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ss18Q62280 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ss18Q62280 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Ss18Q62280 Gm11400-201ENSMUST00000120853 1214 ntBASIC9.41□□□□□ -0.9
Ss18Q62280 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC9.41□□□□□ -0.9
Ss18Q62280 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC9.41□□□□□ -0.9
Ss18Q62280 Gm42612-201ENSMUST00000197986 623 ntBASIC9.41□□□□□ -0.9
Ss18Q62280 Gm43170-201ENSMUST00000199827 612 ntBASIC9.41□□□□□ -0.9
Ss18Q62280 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ss18Q62280 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ss18Q62280 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
Ss18Q62280 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ss18Q62280 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ss18Q62280 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ss18Q62280 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ss18Q62280 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ss18Q62280 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ss18Q62280 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ss18Q62280 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Ss18Q62280 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ss18Q62280 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ss18Q62280 CT025624.1-201ENSMUST00000224007 2700 ntBASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms