Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Foxc1Q61572 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Foxc1Q61572 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Foxc1Q61572 Gm12742-201ENSMUST00000117326 410 ntBASIC9.62□□□□□ -0.87
Foxc1Q61572 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC9.62□□□□□ -0.87
Foxc1Q61572 Gm15719-201ENSMUST00000120619 635 ntBASIC9.62□□□□□ -0.87
Foxc1Q61572 Gm7350-201ENSMUST00000120964 636 ntBASIC9.62□□□□□ -0.87
Foxc1Q61572 Mir1894-201ENSMUST00000122802 81 ntBASIC9.62□□□□□ -0.87
Foxc1Q61572 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC9.62□□□□□ -0.87
Foxc1Q61572 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Foxc1Q61572 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Foxc1Q61572 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Foxc1Q61572 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Foxc1Q61572 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Foxc1Q61572 Mir7085-201ENSMUST00000184353 66 ntBASIC9.62□□□□□ -0.87
Foxc1Q61572 Ptma-202ENSMUST00000186255 768 ntTSL 2 BASIC9.62□□□□□ -0.87
Foxc1Q61572 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Foxc1Q61572 Gm37005-201ENSMUST00000193281 1164 ntBASIC9.62□□□□□ -0.87
Foxc1Q61572 Gm44397-201ENSMUST00000195950 113 ntBASIC9.62□□□□□ -0.87
Foxc1Q61572 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Foxc1Q61572 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC9.62□□□□□ -0.87
Foxc1Q61572 Gm42734-201ENSMUST00000201656 878 ntBASIC9.62□□□□□ -0.87
Foxc1Q61572 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC9.62□□□□□ -0.87
Foxc1Q61572 Gm45841-201ENSMUST00000207700 164 ntBASIC9.62□□□□□ -0.87
Foxc1Q61572 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Foxc1Q61572 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC9.62□□□□□ -0.87
Foxc1Q61572 Gm45399-201ENSMUST00000209955 1016 ntBASIC9.62□□□□□ -0.87
Foxc1Q61572 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC9.62□□□□□ -0.87
Foxc1Q61572 Gm17870-201ENSMUST00000219489 1174 ntBASIC9.62□□□□□ -0.87
Foxc1Q61572 AC154245.1-201ENSMUST00000224615 601 ntBASIC9.62□□□□□ -0.87
Foxc1Q61572 AC140368.1-202ENSMUST00000226131 658 ntBASIC9.62□□□□□ -0.87
Foxc1Q61572 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Foxc1Q61572 Gm9899-201ENSMUST00000065519 555 ntBASIC9.62□□□□□ -0.87
Foxc1Q61572 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Foxc1Q61572 Gm3695-201ENSMUST00000087222 1009 ntBASIC9.62□□□□□ -0.87
Foxc1Q61572 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Foxc1Q61572 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
Foxc1Q61572 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Foxc1Q61572 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Foxc1Q61572 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC9.62□□□□□ -0.87
Foxc1Q61572 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Foxc1Q61572 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Foxc1Q61572 Gm7961-201ENSMUST00000201338 1436 ntBASIC9.62□□□□□ -0.87
Foxc1Q61572 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC9.62□□□□□ -0.87
Foxc1Q61572 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Foxc1Q61572 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Foxc1Q61572 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Foxc1Q61572 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Foxc1Q61572 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Foxc1Q61572 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Foxc1Q61572 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Foxc1Q61572 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Foxc1Q61572 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Foxc1Q61572 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Foxc1Q61572 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Foxc1Q61572 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Foxc1Q61572 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Foxc1Q61572 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Foxc1Q61572 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Foxc1Q61572 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Foxc1Q61572 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Foxc1Q61572 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Foxc1Q61572 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Foxc1Q61572 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Foxc1Q61572 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Foxc1Q61572 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Foxc1Q61572 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Foxc1Q61572 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Foxc1Q61572 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC9.61□□□□□ -0.87
Foxc1Q61572 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC9.61□□□□□ -0.87
Foxc1Q61572 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Foxc1Q61572 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Foxc1Q61572 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Foxc1Q61572 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Foxc1Q61572 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Foxc1Q61572 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC9.61□□□□□ -0.87
Foxc1Q61572 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Foxc1Q61572 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Foxc1Q61572 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
Foxc1Q61572 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Foxc1Q61572 Trav4d-2-201ENSMUST00000120914 335 ntBASIC9.61□□□□□ -0.87
Foxc1Q61572 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Foxc1Q61572 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC9.61□□□□□ -0.87
Foxc1Q61572 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Foxc1Q61572 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Foxc1Q61572 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Foxc1Q61572 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Foxc1Q61572 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Foxc1Q61572 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Foxc1Q61572 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC9.61□□□□□ -0.87
Foxc1Q61572 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Foxc1Q61572 Gm8920-201ENSMUST00000196153 924 ntBASIC9.61□□□□□ -0.87
Foxc1Q61572 AC166349.1-201ENSMUST00000220866 695 ntBASIC9.61□□□□□ -0.87
Foxc1Q61572 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Foxc1Q61572 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Foxc1Q61572 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Foxc1Q61572 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Foxc1Q61572 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Foxc1Q61572 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Foxc1Q61572 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms