Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ift88Q61371 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ift88Q61371 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ift88Q61371 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ift88Q61371 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ift88Q61371 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.09□□□□□ -0.15
Ift88Q61371 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.09□□□□□ -0.15
Ift88Q61371 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Ift88Q61371 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ift88Q61371 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ift88Q61371 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ift88Q61371 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.09□□□□□ -0.15
Ift88Q61371 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.09□□□□□ -0.15
Ift88Q61371 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ift88Q61371 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ift88Q61371 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ift88Q61371 Nupl1-206ENSMUST00000225111 2936 ntBASIC14.08□□□□□ -0.15
Ift88Q61371 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.08□□□□□ -0.15
Ift88Q61371 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ift88Q61371 Gm2420-201ENSMUST00000119864 2149 ntBASIC14.08□□□□□ -0.16
Ift88Q61371 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ift88Q61371 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ift88Q61371 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.08□□□□□ -0.16
Ift88Q61371 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ift88Q61371 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ift88Q61371 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ift88Q61371 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC14.08□□□□□ -0.16
Ift88Q61371 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ift88Q61371 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ift88Q61371 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ift88Q61371 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ift88Q61371 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Ift88Q61371 Gm9630-201ENSMUST00000178304 885 ntBASIC14.08□□□□□ -0.16
Ift88Q61371 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.08□□□□□ -0.16
Ift88Q61371 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC14.08□□□□□ -0.16
Ift88Q61371 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.08□□□□□ -0.16
Ift88Q61371 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ift88Q61371 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Ift88Q61371 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ift88Q61371 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ift88Q61371 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ift88Q61371 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ift88Q61371 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.08□□□□□ -0.16
Ift88Q61371 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC14.08□□□□□ -0.16
Ift88Q61371 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ift88Q61371 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ift88Q61371 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ift88Q61371 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ift88Q61371 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ift88Q61371 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ift88Q61371 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ift88Q61371 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ift88Q61371 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ift88Q61371 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ift88Q61371 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ift88Q61371 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ift88Q61371 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ift88Q61371 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ift88Q61371 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ift88Q61371 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC14.07□□□□□ -0.16
Ift88Q61371 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC14.07□□□□□ -0.16
Ift88Q61371 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ift88Q61371 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ift88Q61371 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ift88Q61371 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ift88Q61371 Gm43417-201ENSMUST00000201586 5207 ntBASIC14.07□□□□□ -0.16
Ift88Q61371 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ift88Q61371 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ift88Q61371 Gm12859-201ENSMUST00000117834 427 ntBASIC14.07□□□□□ -0.16
Ift88Q61371 Gm11618-201ENSMUST00000117946 267 ntBASIC14.07□□□□□ -0.16
Ift88Q61371 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.07□□□□□ -0.16
Ift88Q61371 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.07□□□□□ -0.16
Ift88Q61371 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14.07□□□□□ -0.16
Ift88Q61371 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Ift88Q61371 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.07□□□□□ -0.16
Ift88Q61371 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ift88Q61371 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ift88Q61371 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ift88Q61371 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ift88Q61371 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ift88Q61371 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ift88Q61371 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ift88Q61371 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ift88Q61371 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ift88Q61371 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ift88Q61371 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ift88Q61371 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ift88Q61371 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ift88Q61371 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ift88Q61371 CT009713.10-201ENSMUST00000225013 1986 ntBASIC14.07□□□□□ -0.16
Ift88Q61371 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ift88Q61371 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ift88Q61371 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ift88Q61371 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ift88Q61371 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ift88Q61371 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ift88Q61371 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ift88Q61371 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ift88Q61371 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ift88Q61371 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms