Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm12291-201ENSMUST00000121627 311 ntBASIC10.96□□□□□ -0.65
Trav5d-4Q5R1F6 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC10.96□□□□□ -0.65
Trav5d-4Q5R1F6 Gm22331-201ENSMUST00000158066 136 ntBASIC10.96□□□□□ -0.65
Trav5d-4Q5R1F6 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC10.96□□□□□ -0.65
Trav5d-4Q5R1F6 Gm37497-201ENSMUST00000195830 798 ntBASIC10.96□□□□□ -0.65
Trav5d-4Q5R1F6 AC166051.1-201ENSMUST00000214313 210 ntBASIC10.96□□□□□ -0.65
Trav5d-4Q5R1F6 Gm7653-201ENSMUST00000214567 508 ntBASIC10.96□□□□□ -0.65
Trav5d-4Q5R1F6 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC10.96□□□□□ -0.65
Trav5d-4Q5R1F6 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Trav5d-4Q5R1F6 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav5d-4Q5R1F6 Gm10146-201ENSMUST00000072739 309 ntBASIC10.96□□□□□ -0.65
Trav5d-4Q5R1F6 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav5d-4Q5R1F6 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Trav5d-4Q5R1F6 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Trav5d-4Q5R1F6 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav5d-4Q5R1F6 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav5d-4Q5R1F6 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav5d-4Q5R1F6 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav5d-4Q5R1F6 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav5d-4Q5R1F6 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav5d-4Q5R1F6 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav5d-4Q5R1F6 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC10.96□□□□□ -0.66
Trav5d-4Q5R1F6 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.96□□□□□ -0.66
Trav5d-4Q5R1F6 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav5d-4Q5R1F6 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav5d-4Q5R1F6 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Gm14704-201ENSMUST00000120300 874 ntBASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Gm26185-201ENSMUST00000157692 266 ntBASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Gm24196-201ENSMUST00000179161 110 ntBASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5d-4Q5R1F6 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 AC117194.1-201ENSMUST00000224847 3002 ntBASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 Gm11478-201ENSMUST00000117851 599 ntBASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 Mup-ps23-201ENSMUST00000118063 630 ntBASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 Gm2231-201ENSMUST00000125661 612 ntBASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5d-4Q5R1F6 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms