Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Trim41Q5NCC3 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Trim41Q5NCC3 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim41Q5NCC3 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim41Q5NCC3 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim41Q5NCC3 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim41Q5NCC3 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim41Q5NCC3 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Trim41Q5NCC3 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Trim41Q5NCC3 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim41Q5NCC3 Gm14460-201ENSMUST00000121511 639 ntBASIC22.13■■□□□ 1.13
Trim41Q5NCC3 Gm20614-201ENSMUST00000177106 632 ntBASIC22.13■■□□□ 1.13
Trim41Q5NCC3 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim41Q5NCC3 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim41Q5NCC3 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Trim41Q5NCC3 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Trim41Q5NCC3 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim41Q5NCC3 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Trim41Q5NCC3 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim41Q5NCC3 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim41Q5NCC3 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim41Q5NCC3 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim41Q5NCC3 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim41Q5NCC3 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim41Q5NCC3 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim41Q5NCC3 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim41Q5NCC3 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC22.12■■□□□ 1.13
Trim41Q5NCC3 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trim41Q5NCC3 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trim41Q5NCC3 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Trim41Q5NCC3 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
Trim41Q5NCC3 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC22.12■■□□□ 1.13
Trim41Q5NCC3 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trim41Q5NCC3 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Trim41Q5NCC3 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Trim41Q5NCC3 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Trim41Q5NCC3 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trim41Q5NCC3 Gm15432-201ENSMUST00000121106 195 ntBASIC22.12■■□□□ 1.13
Trim41Q5NCC3 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC22.12■■□□□ 1.13
Trim41Q5NCC3 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trim41Q5NCC3 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC22.12■■□□□ 1.13
Trim41Q5NCC3 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC22.12■■□□□ 1.13
Trim41Q5NCC3 AC161537.1-201ENSMUST00000226199 1015 ntBASIC22.12■■□□□ 1.13
Trim41Q5NCC3 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trim41Q5NCC3 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Trim41Q5NCC3 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Trim41Q5NCC3 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Trim41Q5NCC3 Gm45242-201ENSMUST00000210666 2129 ntBASIC22.12■■□□□ 1.13
Trim41Q5NCC3 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Trim41Q5NCC3 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Trim41Q5NCC3 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC22.11■■□□□ 1.13
Trim41Q5NCC3 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC22.11■■□□□ 1.13
Trim41Q5NCC3 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC22.11■■□□□ 1.13
Trim41Q5NCC3 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trim41Q5NCC3 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Trim41Q5NCC3 Gm11470-201ENSMUST00000118868 1475 ntBASIC22.11■■□□□ 1.13
Trim41Q5NCC3 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trim41Q5NCC3 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trim41Q5NCC3 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Trim41Q5NCC3 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Trim41Q5NCC3 Gm5621-201ENSMUST00000187303 640 ntBASIC22.11■■□□□ 1.13
Trim41Q5NCC3 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Trim41Q5NCC3 Gm8768-201ENSMUST00000220020 826 ntBASIC22.11■■□□□ 1.13
Trim41Q5NCC3 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Trim41Q5NCC3 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Trim41Q5NCC3 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Trim41Q5NCC3 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Trim41Q5NCC3 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trim41Q5NCC3 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Trim41Q5NCC3 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Trim41Q5NCC3 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Trim41Q5NCC3 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Trim41Q5NCC3 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Trim41Q5NCC3 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC22.1■■□□□ 1.13
Trim41Q5NCC3 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC22.1■■□□□ 1.13
Trim41Q5NCC3 Gm4864-201ENSMUST00000219894 1461 ntBASIC22.1■■□□□ 1.13
Trim41Q5NCC3 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
Trim41Q5NCC3 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Trim41Q5NCC3 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Trim41Q5NCC3 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC22.1■■□□□ 1.13
Trim41Q5NCC3 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC22.1■■□□□ 1.13
Trim41Q5NCC3 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC22.1■■□□□ 1.13
Trim41Q5NCC3 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC22.1■■□□□ 1.13
Trim41Q5NCC3 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Trim41Q5NCC3 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Trim41Q5NCC3 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Trim41Q5NCC3 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Trim41Q5NCC3 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Trim41Q5NCC3 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Trim41Q5NCC3 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Trim41Q5NCC3 Gm7848-201ENSMUST00000210739 718 ntBASIC22.1■■□□□ 1.13
Trim41Q5NCC3 AC165260.3-202ENSMUST00000224550 1031 ntBASIC22.1■■□□□ 1.13
Trim41Q5NCC3 AC154184.3-201ENSMUST00000225620 1090 ntBASIC22.1■■□□□ 1.13
Trim41Q5NCC3 AC138604.1-201ENSMUST00000226969 739 ntBASIC22.1■■□□□ 1.13
Trim41Q5NCC3 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Trim41Q5NCC3 Gm7551-201ENSMUST00000089593 1074 ntBASIC22.1■■□□□ 1.13
Trim41Q5NCC3 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Trim41Q5NCC3 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Trim41Q5NCC3 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Trim41Q5NCC3 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms