Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cks1brtQ3UNC9 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC9.13□□□□□ -0.95
Cks1brtQ3UNC9 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
Cks1brtQ3UNC9 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC9.13□□□□□ -0.95
Cks1brtQ3UNC9 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Gm9385-201ENSMUST00000117563 472 ntBASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Gm29310-201ENSMUST00000185468 696 ntBASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Gm21825-201ENSMUST00000185728 696 ntBASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Gm29109-201ENSMUST00000185895 696 ntBASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Gm21896-201ENSMUST00000186520 696 ntBASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Gm21873-201ENSMUST00000186728 696 ntBASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Gm21794-201ENSMUST00000187056 696 ntBASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Gm21880-201ENSMUST00000187275 696 ntBASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Gm21826-201ENSMUST00000187451 696 ntBASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Gm21198-201ENSMUST00000188393 696 ntBASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Gm21749-201ENSMUST00000189343 696 ntBASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Gm21901-201ENSMUST00000189568 696 ntBASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Gm29424-201ENSMUST00000189716 696 ntBASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Gm28599-201ENSMUST00000189838 694 ntBASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Gm21867-201ENSMUST00000189917 696 ntBASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Gm29269-201ENSMUST00000190087 696 ntBASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Gm21722-201ENSMUST00000190153 696 ntBASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Gm28423-201ENSMUST00000190701 696 ntBASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Gm21899-201ENSMUST00000190745 696 ntBASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Gm21910-201ENSMUST00000191163 696 ntBASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Gm21849-201ENSMUST00000191571 696 ntBASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Gm28678-201ENSMUST00000191593 696 ntBASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Gm20910-201ENSMUST00000193268 696 ntBASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Gm21871-201ENSMUST00000194621 696 ntBASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Gm44124-201ENSMUST00000204159 472 ntBASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Gm6376-201ENSMUST00000209407 580 ntBASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 AV026068-213ENSMUST00000223675 1171 ntBASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Gm19972-201ENSMUST00000218180 5664 ntBASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Gm7224-201ENSMUST00000121359 2066 ntBASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cks1brtQ3UNC9 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cks1brtQ3UNC9 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms