Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm44616-201ENSMUST00000206417 1732 ntBASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Spg11Q3UHA3 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Spg11Q3UHA3 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Spg11Q3UHA3 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Spg11Q3UHA3 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Spg11Q3UHA3 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Spg11Q3UHA3 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Spg11Q3UHA3 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Spg11Q3UHA3 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Spg11Q3UHA3 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Spg11Q3UHA3 Gm25063-201ENSMUST00000104666 94 ntBASIC11.66□□□□□ -0.54
Spg11Q3UHA3 Gm17070-201ENSMUST00000170463 784 ntBASIC11.66□□□□□ -0.54
Spg11Q3UHA3 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC11.66□□□□□ -0.54
Spg11Q3UHA3 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.66□□□□□ -0.54
Spg11Q3UHA3 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC11.66□□□□□ -0.54
Spg11Q3UHA3 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Spg11Q3UHA3 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Spg11Q3UHA3 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Spg11Q3UHA3 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Spg11Q3UHA3 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Spg11Q3UHA3 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Spg11Q3UHA3 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Spg11Q3UHA3 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Spg11Q3UHA3 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Spg11Q3UHA3 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.66□□□□□ -0.54
Spg11Q3UHA3 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Spg11Q3UHA3 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Spg11Q3UHA3 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Spg11Q3UHA3 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Spg11Q3UHA3 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Spg11Q3UHA3 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Spg11Q3UHA3 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC11.66□□□□□ -0.54
Spg11Q3UHA3 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Spg11Q3UHA3 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Spg11Q3UHA3 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Spg11Q3UHA3 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.66□□□□□ -0.54
Spg11Q3UHA3 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.66□□□□□ -0.54
Spg11Q3UHA3 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC11.66□□□□□ -0.54
Spg11Q3UHA3 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Spg11Q3UHA3 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Spg11Q3UHA3 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Spg11Q3UHA3 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Spg11Q3UHA3 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.66□□□□□ -0.54
Spg11Q3UHA3 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Spg11Q3UHA3 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.65□□□□□ -0.54
Spg11Q3UHA3 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Spg11Q3UHA3 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.65□□□□□ -0.54
Spg11Q3UHA3 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Spg11Q3UHA3 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Spg11Q3UHA3 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.65□□□□□ -0.54
Spg11Q3UHA3 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Spg11Q3UHA3 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Spg11Q3UHA3 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.65□□□□□ -0.54
Spg11Q3UHA3 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.65□□□□□ -0.54
Spg11Q3UHA3 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Spg11Q3UHA3 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.65□□□□□ -0.54
Spg11Q3UHA3 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Spg11Q3UHA3 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.65□□□□□ -0.54
Spg11Q3UHA3 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Spg11Q3UHA3 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Spg11Q3UHA3 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Spg11Q3UHA3 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Spg11Q3UHA3 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Spg11Q3UHA3 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Spg11Q3UHA3 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Spg11Q3UHA3 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Spg11Q3UHA3 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Spg11Q3UHA3 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Spg11Q3UHA3 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.65□□□□□ -0.54
Spg11Q3UHA3 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Spg11Q3UHA3 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Spg11Q3UHA3 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Spg11Q3UHA3 Gm12712-201ENSMUST00000120676 801 ntBASIC11.65□□□□□ -0.55
Spg11Q3UHA3 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Spg11Q3UHA3 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Spg11Q3UHA3 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC11.65□□□□□ -0.55
Spg11Q3UHA3 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Spg11Q3UHA3 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.65□□□□□ -0.55
Spg11Q3UHA3 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Spg11Q3UHA3 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.55
Spg11Q3UHA3 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Spg11Q3UHA3 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Spg11Q3UHA3 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.65□□□□□ -0.55
Spg11Q3UHA3 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Spg11Q3UHA3 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Spg11Q3UHA3 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Spg11Q3UHA3 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 AC133083.1-201ENSMUST00000221736 2209 ntBASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Spg11Q3UHA3 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms