Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Q3U1D9 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.1□□□□□ -0.63
Q3U1D9 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Q3U1D9 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Q3U1D9 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Q3U1D9 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Q3U1D9 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Q3U1D9 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Q3U1D9 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Q3U1D9 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.09□□□□□ -0.63
Q3U1D9 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.09□□□□□ -0.63
Q3U1D9 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Q3U1D9 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Q3U1D9 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Q3U1D9 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Q3U1D9 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Q3U1D9 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Q3U1D9 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Q3U1D9 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Q3U1D9 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Q3U1D9 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Q3U1D9 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Q3U1D9 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Q3U1D9 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Q3U1D9 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Q3U1D9 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Q3U1D9 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.09□□□□□ -0.63
Q3U1D9 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Q3U1D9 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.09□□□□□ -0.63
Q3U1D9 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Q3U1D9 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Q3U1D9 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Q3U1D9 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.09□□□□□ -0.63
Q3U1D9 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.09□□□□□ -0.63
Q3U1D9 Gm6082-201ENSMUST00000215204 454 ntBASIC11.09□□□□□ -0.63
Q3U1D9 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.09□□□□□ -0.63
Q3U1D9 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Q3U1D9 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Q3U1D9 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.09□□□□□ -0.63
Q3U1D9 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Q3U1D9 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.09□□□□□ -0.63
Q3U1D9 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Q3U1D9 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Q3U1D9 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.63
Q3U1D9 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Q3U1D9 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Q3U1D9 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.63
Q3U1D9 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Q3U1D9 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Q3U1D9 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Q3U1D9 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Q3U1D9 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Q3U1D9 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.08□□□□□ -0.64
Q3U1D9 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Q3U1D9 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.08□□□□□ -0.64
Q3U1D9 Gm12058-201ENSMUST00000118614 437 ntBASIC11.08□□□□□ -0.64
Q3U1D9 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.08□□□□□ -0.64
Q3U1D9 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Q3U1D9 Gm27023-201ENSMUST00000182372 285 ntBASIC11.08□□□□□ -0.64
Q3U1D9 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.08□□□□□ -0.64
Q3U1D9 Gm38241-201ENSMUST00000192641 898 ntBASIC11.08□□□□□ -0.64
Q3U1D9 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.08□□□□□ -0.64
Q3U1D9 Gm44405-201ENSMUST00000198952 126 ntBASIC11.08□□□□□ -0.64
Q3U1D9 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Q3U1D9 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Q3U1D9 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.08□□□□□ -0.64
Q3U1D9 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.08□□□□□ -0.64
Q3U1D9 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.08□□□□□ -0.64
Q3U1D9 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Q3U1D9 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Q3U1D9 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Q3U1D9 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.08□□□□□ -0.64
Q3U1D9 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Q3U1D9 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Q3U1D9 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Q3U1D9 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Q3U1D9 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Q3U1D9 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Q3U1D9 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Q3U1D9 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Q3U1D9 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Q3U1D9 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Q3U1D9 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.08□□□□□ -0.64
Q3U1D9 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.08□□□□□ -0.64
Q3U1D9 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.08□□□□□ -0.64
Q3U1D9 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Q3U1D9 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.07□□□□□ -0.64
Q3U1D9 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.07□□□□□ -0.64
Q3U1D9 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Q3U1D9 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Q3U1D9 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Q3U1D9 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Q3U1D9 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
Q3U1D9 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Q3U1D9 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Q3U1D9 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Q3U1D9 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Q3U1D9 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Q3U1D9 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Q3U1D9 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms