Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 AC132467.2-202ENSMUST00000227726 559 ntBASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Fndc4Q3TR08 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.89□□□□□ -0.67
Fndc4Q3TR08 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Fndc4Q3TR08 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Gm5466-201ENSMUST00000119395 1890 ntBASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Fndc4Q3TR08 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Mir7221-201ENSMUST00000184009 72 ntBASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Gm6473-201ENSMUST00000188572 1210 ntBASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Gm38144-201ENSMUST00000192790 465 ntBASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Gm18307-201ENSMUST00000206864 949 ntBASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC10.88□□□□□ -0.67
Fndc4Q3TR08 AC155286.1-201ENSMUST00000218632 448 ntBASIC10.88□□□□□ -0.67
Fndc4Q3TR08 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Fndc4Q3TR08 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms