Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC11.34□□□□□ -0.59
Chd8Q09XV5 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd8Q09XV5 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd8Q09XV5 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd8Q09XV5 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.34□□□□□ -0.59
Chd8Q09XV5 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.34□□□□□ -0.59
Chd8Q09XV5 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Chd8Q09XV5 Gm8199-201ENSMUST00000121323 823 ntBASIC11.34□□□□□ -0.59
Chd8Q09XV5 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Chd8Q09XV5 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd8Q09XV5 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC11.34□□□□□ -0.59
Chd8Q09XV5 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd8Q09XV5 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd8Q09XV5 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd8Q09XV5 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chd8Q09XV5 Gm16011-201ENSMUST00000121567 2662 ntBASIC11.34□□□□□ -0.59
Chd8Q09XV5 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd8Q09XV5 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chd8Q09XV5 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chd8Q09XV5 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chd8Q09XV5 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC11.34□□□□□ -0.59
Chd8Q09XV5 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.33□□□□□ -0.59
Chd8Q09XV5 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Gm45630-201ENSMUST00000210243 1911 ntBASIC11.33□□□□□ -0.6
Chd8Q09XV5 Mir705-201ENSMUST00000102058 82 ntBASIC11.33□□□□□ -0.6
Chd8Q09XV5 Gm11619-201ENSMUST00000117474 237 ntBASIC11.33□□□□□ -0.6
Chd8Q09XV5 Gm8731-201ENSMUST00000118088 412 ntBASIC11.33□□□□□ -0.6
Chd8Q09XV5 Gm16166-201ENSMUST00000118291 787 ntBASIC11.33□□□□□ -0.6
Chd8Q09XV5 Gm42816-201ENSMUST00000198433 325 ntBASIC11.33□□□□□ -0.6
Chd8Q09XV5 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Gm10288-201ENSMUST00000084614 537 ntBASIC11.33□□□□□ -0.6
Chd8Q09XV5 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd8Q09XV5 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Chd8Q09XV5 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.33□□□□□ -0.6
Chd8Q09XV5 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Gm13281-201ENSMUST00000120871 567 ntBASIC11.33□□□□□ -0.6
Chd8Q09XV5 Gm5395-201ENSMUST00000121650 915 ntBASIC11.33□□□□□ -0.6
Chd8Q09XV5 Gm12906-201ENSMUST00000154610 441 ntBASIC11.33□□□□□ -0.6
Chd8Q09XV5 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.33□□□□□ -0.6
Chd8Q09XV5 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd8Q09XV5 CT571271.1-201ENSMUST00000227071 670 ntBASIC11.33□□□□□ -0.6
Chd8Q09XV5 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Larp1b-204ENSMUST00000099121 1030 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Chd8Q09XV5 Gm42432-201ENSMUST00000197902 1617 ntBASIC11.32□□□□□ -0.6
Chd8Q09XV5 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd8Q09XV5 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd8Q09XV5 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd8Q09XV5 Gm13351-201ENSMUST00000118087 414 ntBASIC11.32□□□□□ -0.6
Chd8Q09XV5 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC11.32□□□□□ -0.6
Chd8Q09XV5 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC11.32□□□□□ -0.6
Chd8Q09XV5 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.32□□□□□ -0.6
Chd8Q09XV5 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.32□□□□□ -0.6
Chd8Q09XV5 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.32□□□□□ -0.6
Chd8Q09XV5 Gm9204-201ENSMUST00000212641 947 ntBASIC11.32□□□□□ -0.6
Chd8Q09XV5 Gm4811-201ENSMUST00000220879 1220 ntBASIC11.32□□□□□ -0.6
Chd8Q09XV5 AC174797.2-201ENSMUST00000225835 165 ntBASIC11.32□□□□□ -0.6
Chd8Q09XV5 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.32□□□□□ -0.6
Chd8Q09XV5 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd8Q09XV5 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Chd8Q09XV5 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd8Q09XV5 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd8Q09XV5 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms