Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smad1P70340 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.17□□□□□ -0.3
Smad1P70340 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smad1P70340 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smad1P70340 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smad1P70340 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Smad1P70340 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smad1P70340 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smad1P70340 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.17□□□□□ -0.3
Smad1P70340 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smad1P70340 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.17□□□□□ -0.3
Smad1P70340 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smad1P70340 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.17□□□□□ -0.3
Smad1P70340 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smad1P70340 Gm18827-201ENSMUST00000188341 790 ntBASIC13.17□□□□□ -0.3
Smad1P70340 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smad1P70340 Gm38223-201ENSMUST00000194484 695 ntBASIC13.17□□□□□ -0.3
Smad1P70340 Gm44397-201ENSMUST00000195950 113 ntBASIC13.17□□□□□ -0.3
Smad1P70340 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.17□□□□□ -0.3
Smad1P70340 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.17□□□□□ -0.3
Smad1P70340 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.17□□□□□ -0.3
Smad1P70340 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smad1P70340 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smad1P70340 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smad1P70340 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smad1P70340 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smad1P70340 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Smad1P70340 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Smad1P70340 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smad1P70340 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smad1P70340 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Smad1P70340 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smad1P70340 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.17□□□□□ -0.3
Smad1P70340 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smad1P70340 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smad1P70340 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smad1P70340 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smad1P70340 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smad1P70340 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smad1P70340 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smad1P70340 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smad1P70340 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smad1P70340 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smad1P70340 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smad1P70340 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smad1P70340 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smad1P70340 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.16□□□□□ -0.3
Smad1P70340 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smad1P70340 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smad1P70340 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smad1P70340 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.16□□□□□ -0.3
Smad1P70340 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smad1P70340 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.16□□□□□ -0.3
Smad1P70340 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.16□□□□□ -0.3
Smad1P70340 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smad1P70340 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.16□□□□□ -0.3
Smad1P70340 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smad1P70340 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smad1P70340 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smad1P70340 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smad1P70340 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smad1P70340 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smad1P70340 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Smad1P70340 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smad1P70340 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smad1P70340 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smad1P70340 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smad1P70340 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smad1P70340 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smad1P70340 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smad1P70340 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smad1P70340 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smad1P70340 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smad1P70340 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smad1P70340 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smad1P70340 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smad1P70340 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smad1P70340 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smad1P70340 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smad1P70340 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smad1P70340 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smad1P70340 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smad1P70340 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.15□□□□□ -0.3
Smad1P70340 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.15□□□□□ -0.3
Smad1P70340 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Smad1P70340 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smad1P70340 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.15□□□□□ -0.3
Smad1P70340 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.15□□□□□ -0.3
Smad1P70340 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.15□□□□□ -0.3
Smad1P70340 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Smad1P70340 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smad1P70340 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.15□□□□□ -0.3
Smad1P70340 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smad1P70340 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smad1P70340 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.15□□□□□ -0.3
Smad1P70340 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Smad1P70340 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smad1P70340 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.15□□□□□ -0.3
Smad1P70340 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Smad1P70340 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms