Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Gm15222-202ENSMUST00000228667 1726 ntBASIC10.66□□□□□ -0.7
Pdlim4P70271 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim4P70271 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim4P70271 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim4P70271 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Pdlim4P70271 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim4P70271 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim4P70271 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Pdlim4P70271 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim4P70271 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim4P70271 AC137842.1-201ENSMUST00000227896 2064 ntBASIC10.65□□□□□ -0.7
Pdlim4P70271 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pdlim4P70271 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pdlim4P70271 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pdlim4P70271 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pdlim4P70271 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pdlim4P70271 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pdlim4P70271 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pdlim4P70271 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pdlim4P70271 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pdlim4P70271 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Pdlim4P70271 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pdlim4P70271 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pdlim4P70271 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC10.65□□□□□ -0.7
Pdlim4P70271 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC10.65□□□□□ -0.7
Pdlim4P70271 Gm29127-201ENSMUST00000188304 517 ntBASIC10.65□□□□□ -0.7
Pdlim4P70271 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC10.65□□□□□ -0.7
Pdlim4P70271 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Pdlim4P70271 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
Pdlim4P70271 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pdlim4P70271 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pdlim4P70271 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pdlim4P70271 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Pdlim4P70271 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Pdlim4P70271 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pdlim4P70271 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pdlim4P70271 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
Pdlim4P70271 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Pdlim4P70271 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Pdlim4P70271 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Pdlim4P70271 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Pdlim4P70271 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Pdlim4P70271 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Pdlim4P70271 Gm14608-201ENSMUST00000120030 1553 ntBASIC10.65□□□□□ -0.71
Pdlim4P70271 Gm9025-201ENSMUST00000122415 1575 ntBASIC10.65□□□□□ -0.71
Pdlim4P70271 AC113060.1-201ENSMUST00000225689 1573 ntBASIC10.65□□□□□ -0.71
Pdlim4P70271 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC10.64□□□□□ -0.71
Pdlim4P70271 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pdlim4P70271 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC10.64□□□□□ -0.71
Pdlim4P70271 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pdlim4P70271 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pdlim4P70271 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pdlim4P70271 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pdlim4P70271 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC10.64□□□□□ -0.71
Pdlim4P70271 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pdlim4P70271 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pdlim4P70271 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pdlim4P70271 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.64□□□□□ -0.71
Pdlim4P70271 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pdlim4P70271 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Pdlim4P70271 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pdlim4P70271 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pdlim4P70271 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pdlim4P70271 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pdlim4P70271 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pdlim4P70271 Gm11425-201ENSMUST00000119608 498 ntBASIC10.64□□□□□ -0.71
Pdlim4P70271 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pdlim4P70271 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pdlim4P70271 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Pdlim4P70271 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC10.64□□□□□ -0.71
Pdlim4P70271 Gm2639-201ENSMUST00000156881 1297 ntBASIC10.64□□□□□ -0.71
Pdlim4P70271 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Pdlim4P70271 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pdlim4P70271 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pdlim4P70271 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC10.64□□□□□ -0.71
Pdlim4P70271 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC10.64□□□□□ -0.71
Pdlim4P70271 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pdlim4P70271 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC10.64□□□□□ -0.71
Pdlim4P70271 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Pdlim4P70271 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pdlim4P70271 Gm9396-201ENSMUST00000076703 567 ntBASIC10.64□□□□□ -0.71
Pdlim4P70271 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pdlim4P70271 n-R5s77-201ENSMUST00000083757 119 ntBASIC10.64□□□□□ -0.71
Pdlim4P70271 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pdlim4P70271 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pdlim4P70271 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC10.64□□□□□ -0.71
Pdlim4P70271 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pdlim4P70271 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pdlim4P70271 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Pdlim4P70271 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pdlim4P70271 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pdlim4P70271 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Pdlim4P70271 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pdlim4P70271 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pdlim4P70271 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pdlim4P70271 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pdlim4P70271 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pdlim4P70271 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Pdlim4P70271 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pdlim4P70271 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms