Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Crnkl1P63154 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Crnkl1P63154 Syt7-204ENSMUST00000223586 1344 ntBASIC12.63□□□□□ -0.39
Crnkl1P63154 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Crnkl1P63154 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Crnkl1P63154 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Crnkl1P63154 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Crnkl1P63154 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Crnkl1P63154 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Crnkl1P63154 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.63□□□□□ -0.39
Crnkl1P63154 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Crnkl1P63154 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Crnkl1P63154 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.63□□□□□ -0.39
Crnkl1P63154 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.63□□□□□ -0.39
Crnkl1P63154 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Crnkl1P63154 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Crnkl1P63154 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.63□□□□□ -0.39
Crnkl1P63154 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Crnkl1P63154 Gm27437-201ENSMUST00000183429 107 ntBASIC12.63□□□□□ -0.39
Crnkl1P63154 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Crnkl1P63154 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.63□□□□□ -0.39
Crnkl1P63154 Gm19931-201ENSMUST00000198920 368 ntBASIC12.63□□□□□ -0.39
Crnkl1P63154 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Crnkl1P63154 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Crnkl1P63154 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Crnkl1P63154 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Crnkl1P63154 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Crnkl1P63154 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Crnkl1P63154 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Crnkl1P63154 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Crnkl1P63154 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Crnkl1P63154 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Crnkl1P63154 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Crnkl1P63154 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.63□□□□□ -0.39
Crnkl1P63154 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.63□□□□□ -0.39
Crnkl1P63154 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.63□□□□□ -0.39
Crnkl1P63154 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Crnkl1P63154 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Crnkl1P63154 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Crnkl1P63154 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.63□□□□□ -0.39
Crnkl1P63154 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.63□□□□□ -0.39
Crnkl1P63154 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Crnkl1P63154 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Crnkl1P63154 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.62□□□□□ -0.39
Crnkl1P63154 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Crnkl1P63154 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Crnkl1P63154 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Crnkl1P63154 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Crnkl1P63154 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Crnkl1P63154 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Crnkl1P63154 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Crnkl1P63154 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Crnkl1P63154 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Crnkl1P63154 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.62□□□□□ -0.39
Crnkl1P63154 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Crnkl1P63154 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Crnkl1P63154 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.62□□□□□ -0.39
Crnkl1P63154 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Crnkl1P63154 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Crnkl1P63154 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.62□□□□□ -0.39
Crnkl1P63154 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Crnkl1P63154 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Crnkl1P63154 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.62□□□□□ -0.39
Crnkl1P63154 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Crnkl1P63154 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.62□□□□□ -0.39
Crnkl1P63154 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Crnkl1P63154 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.62□□□□□ -0.39
Crnkl1P63154 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Crnkl1P63154 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Crnkl1P63154 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Crnkl1P63154 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Crnkl1P63154 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Crnkl1P63154 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Crnkl1P63154 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Crnkl1P63154 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Crnkl1P63154 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Crnkl1P63154 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.62□□□□□ -0.39
Crnkl1P63154 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Crnkl1P63154 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.62□□□□□ -0.39
Crnkl1P63154 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.62□□□□□ -0.39
Crnkl1P63154 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Crnkl1P63154 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.62□□□□□ -0.39
Crnkl1P63154 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Crnkl1P63154 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Crnkl1P63154 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Crnkl1P63154 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Crnkl1P63154 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Crnkl1P63154 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Crnkl1P63154 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Crnkl1P63154 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Crnkl1P63154 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Crnkl1P63154 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Crnkl1P63154 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.61□□□□□ -0.39
Crnkl1P63154 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Crnkl1P63154 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Crnkl1P63154 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Crnkl1P63154 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Crnkl1P63154 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Crnkl1P63154 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Crnkl1P63154 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 96.5 ms