Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm3P62311 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.6□□□□□ -0.55
Lsm3P62311 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lsm3P62311 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.59□□□□□ -0.55
Lsm3P62311 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm3P62311 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Lsm3P62311 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm3P62311 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm3P62311 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm3P62311 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.59□□□□□ -0.55
Lsm3P62311 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Lsm3P62311 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm3P62311 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm3P62311 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Lsm3P62311 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm3P62311 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Lsm3P62311 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.59□□□□□ -0.55
Lsm3P62311 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.59□□□□□ -0.55
Lsm3P62311 Gm12428-201ENSMUST00000119844 727 ntBASIC11.59□□□□□ -0.55
Lsm3P62311 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.59□□□□□ -0.55
Lsm3P62311 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.59□□□□□ -0.55
Lsm3P62311 Gm12403-201ENSMUST00000121384 959 ntBASIC11.59□□□□□ -0.55
Lsm3P62311 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.59□□□□□ -0.55
Lsm3P62311 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.59□□□□□ -0.55
Lsm3P62311 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.59□□□□□ -0.55
Lsm3P62311 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.59□□□□□ -0.55
Lsm3P62311 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm3P62311 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.59□□□□□ -0.55
Lsm3P62311 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm3P62311 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.59□□□□□ -0.55
Lsm3P62311 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Lsm3P62311 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm3P62311 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.59□□□□□ -0.55
Lsm3P62311 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.59□□□□□ -0.55
Lsm3P62311 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm3P62311 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm3P62311 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm3P62311 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm3P62311 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Lsm3P62311 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm3P62311 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm3P62311 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm3P62311 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm3P62311 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm3P62311 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm3P62311 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Lsm3P62311 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lsm3P62311 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Lsm3P62311 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm3P62311 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm3P62311 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm3P62311 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm3P62311 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm3P62311 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Lsm3P62311 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm3P62311 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm3P62311 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm3P62311 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm3P62311 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm3P62311 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm3P62311 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm3P62311 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm3P62311 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm3P62311 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC11.58□□□□□ -0.56
Lsm3P62311 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC11.58□□□□□ -0.56
Lsm3P62311 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC11.58□□□□□ -0.56
Lsm3P62311 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Lsm3P62311 Gm18766-201ENSMUST00000189811 808 ntBASIC11.58□□□□□ -0.56
Lsm3P62311 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm3P62311 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.58□□□□□ -0.56
Lsm3P62311 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm3P62311 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Lsm3P62311 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Lsm3P62311 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Lsm3P62311 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Lsm3P62311 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Lsm3P62311 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.58□□□□□ -0.56
Lsm3P62311 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm3P62311 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm3P62311 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm3P62311 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm3P62311 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm3P62311 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm3P62311 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm3P62311 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm3P62311 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Lsm3P62311 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm3P62311 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm3P62311 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Lsm3P62311 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm3P62311 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm3P62311 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm3P62311 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm3P62311 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lsm3P62311 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm3P62311 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm3P62311 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Lsm3P62311 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.57□□□□□ -0.56
Lsm3P62311 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm3P62311 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms