Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.96□□□□□ -0.33
Vps4bP46467 Gm8463-201ENSMUST00000208573 613 ntBASIC12.96□□□□□ -0.33
Vps4bP46467 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Vps4bP46467 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps4bP46467 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Vps4bP46467 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps4bP46467 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps4bP46467 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Vps4bP46467 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vps4bP46467 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Vps4bP46467 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vps4bP46467 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vps4bP46467 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vps4bP46467 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Vps4bP46467 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.95□□□□□ -0.34
Vps4bP46467 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.95□□□□□ -0.34
Vps4bP46467 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps4bP46467 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps4bP46467 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Vps4bP46467 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vps4bP46467 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.95□□□□□ -0.34
Vps4bP46467 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Vps4bP46467 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Vps4bP46467 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vps4bP46467 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vps4bP46467 Gm14921-201ENSMUST00000118643 908 ntBASIC12.95□□□□□ -0.34
Vps4bP46467 Gm11425-201ENSMUST00000119608 498 ntBASIC12.95□□□□□ -0.34
Vps4bP46467 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps4bP46467 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.95□□□□□ -0.34
Vps4bP46467 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vps4bP46467 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Vps4bP46467 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vps4bP46467 Gm28911-201ENSMUST00000188837 117 ntBASIC12.95□□□□□ -0.34
Vps4bP46467 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.95□□□□□ -0.34
Vps4bP46467 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.95□□□□□ -0.34
Vps4bP46467 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.95□□□□□ -0.34
Vps4bP46467 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.95□□□□□ -0.34
Vps4bP46467 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps4bP46467 Gm9396-201ENSMUST00000076703 567 ntBASIC12.95□□□□□ -0.34
Vps4bP46467 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vps4bP46467 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps4bP46467 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps4bP46467 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vps4bP46467 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps4bP46467 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Vps4bP46467 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps4bP46467 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps4bP46467 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps4bP46467 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Vps4bP46467 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps4bP46467 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps4bP46467 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps4bP46467 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps4bP46467 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Vps4bP46467 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.94□□□□□ -0.34
Vps4bP46467 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps4bP46467 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps4bP46467 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps4bP46467 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
Vps4bP46467 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps4bP46467 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps4bP46467 Gm13612-201ENSMUST00000119276 390 ntBASIC12.94□□□□□ -0.34
Vps4bP46467 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.94□□□□□ -0.34
Vps4bP46467 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vps4bP46467 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Vps4bP46467 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.94□□□□□ -0.34
Vps4bP46467 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.94□□□□□ -0.34
Vps4bP46467 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.94□□□□□ -0.34
Vps4bP46467 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps4bP46467 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vps4bP46467 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps4bP46467 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vps4bP46467 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vps4bP46467 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Vps4bP46467 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.94□□□□□ -0.34
Vps4bP46467 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps4bP46467 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Vps4bP46467 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps4bP46467 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps4bP46467 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps4bP46467 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.93□□□□□ -0.34
Vps4bP46467 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4bP46467 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4bP46467 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4bP46467 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4bP46467 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4bP46467 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4bP46467 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Vps4bP46467 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.93□□□□□ -0.34
Vps4bP46467 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.93□□□□□ -0.34
Vps4bP46467 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.93□□□□□ -0.34
Vps4bP46467 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4bP46467 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.93□□□□□ -0.34
Vps4bP46467 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.93□□□□□ -0.34
Vps4bP46467 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4bP46467 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4bP46467 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4bP46467 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4bP46467 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Vps4bP46467 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms