Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-6P43688 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-6P43688 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-6P43688 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-6P43688 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-6P43688 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Nkx2-6P43688 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Nkx2-6P43688 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-6P43688 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Nkx2-6P43688 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Nkx2-6P43688 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Nkx2-6P43688 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-6P43688 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Nkx2-6P43688 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-6P43688 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-6P43688 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-6P43688 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-6P43688 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-6P43688 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.07□□□□□ -0.48
Nkx2-6P43688 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Nkx2-6P43688 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-6P43688 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.07□□□□□ -0.48
Nkx2-6P43688 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.07□□□□□ -0.48
Nkx2-6P43688 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-6P43688 Gm23363-201ENSMUST00000175024 79 ntBASIC12.07□□□□□ -0.48
Nkx2-6P43688 Gm2383-201ENSMUST00000181461 807 ntBASIC12.07□□□□□ -0.48
Nkx2-6P43688 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.07□□□□□ -0.48
Nkx2-6P43688 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.07□□□□□ -0.48
Nkx2-6P43688 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.07□□□□□ -0.48
Nkx2-6P43688 Gm5904-201ENSMUST00000210286 865 ntBASIC12.07□□□□□ -0.48
Nkx2-6P43688 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.07□□□□□ -0.48
Nkx2-6P43688 Gm5950-201ENSMUST00000213337 772 ntBASIC12.07□□□□□ -0.48
Nkx2-6P43688 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-6P43688 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-6P43688 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-6P43688 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-6P43688 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-6P43688 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-6P43688 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-6P43688 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-6P43688 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-6P43688 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.07□□□□□ -0.48
Nkx2-6P43688 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.07□□□□□ -0.48
Nkx2-6P43688 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-6P43688 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-6P43688 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.07□□□□□ -0.48
Nkx2-6P43688 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-6P43688 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-6P43688 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-6P43688 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-6P43688 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.06□□□□□ -0.48
Nkx2-6P43688 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Nkx2-6P43688 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Nkx2-6P43688 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-6P43688 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-6P43688 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-6P43688 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Nkx2-6P43688 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Nkx2-6P43688 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-6P43688 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-6P43688 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-6P43688 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-6P43688 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-6P43688 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.06□□□□□ -0.48
Nkx2-6P43688 Gm11531-201ENSMUST00000117614 555 ntBASIC12.06□□□□□ -0.48
Nkx2-6P43688 Gm12058-201ENSMUST00000118614 437 ntBASIC12.06□□□□□ -0.48
Nkx2-6P43688 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.06□□□□□ -0.48
Nkx2-6P43688 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.06□□□□□ -0.48
Nkx2-6P43688 Gm38317-201ENSMUST00000195564 343 ntBASIC12.06□□□□□ -0.48
Nkx2-6P43688 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-6P43688 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.06□□□□□ -0.48
Nkx2-6P43688 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Nkx2-6P43688 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-6P43688 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-6P43688 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.06□□□□□ -0.48
Nkx2-6P43688 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.06□□□□□ -0.48
Nkx2-6P43688 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-6P43688 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Nkx2-6P43688 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-6P43688 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-6P43688 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-6P43688 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-6P43688 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.06□□□□□ -0.48
Nkx2-6P43688 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-6P43688 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-6P43688 Daam2-202ENSMUST00000224595 1926 ntBASIC12.05□□□□□ -0.48
Nkx2-6P43688 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-6P43688 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-6P43688 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-6P43688 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-6P43688 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.05□□□□□ -0.48
Nkx2-6P43688 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-6P43688 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-6P43688 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.05□□□□□ -0.48
Nkx2-6P43688 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-6P43688 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-6P43688 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-6P43688 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-6P43688 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Nkx2-6P43688 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms