Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Tnfsf4P43488 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.3□□□□□ -0.44
Tnfsf4P43488 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf4P43488 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf4P43488 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf4P43488 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf4P43488 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf4P43488 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf4P43488 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf4P43488 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Tnfsf4P43488 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.3□□□□□ -0.44
Tnfsf4P43488 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.3□□□□□ -0.44
Tnfsf4P43488 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf4P43488 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.3□□□□□ -0.44
Tnfsf4P43488 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.3□□□□□ -0.44
Tnfsf4P43488 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.3□□□□□ -0.44
Tnfsf4P43488 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf4P43488 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf4P43488 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf4P43488 Gm15823-201ENSMUST00000064305 670 ntBASIC12.3□□□□□ -0.44
Tnfsf4P43488 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf4P43488 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Tnfsf4P43488 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf4P43488 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.3□□□□□ -0.44
Tnfsf4P43488 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf4P43488 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.3□□□□□ -0.44
Tnfsf4P43488 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf4P43488 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.3□□□□□ -0.44
Tnfsf4P43488 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf4P43488 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf4P43488 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf4P43488 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf4P43488 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf4P43488 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf4P43488 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf4P43488 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfsf4P43488 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf4P43488 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf4P43488 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf4P43488 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Tnfsf4P43488 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Tnfsf4P43488 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf4P43488 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.29□□□□□ -0.44
Tnfsf4P43488 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Tnfsf4P43488 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf4P43488 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf4P43488 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf4P43488 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Tnfsf4P43488 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.29□□□□□ -0.44
Tnfsf4P43488 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf4P43488 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.29□□□□□ -0.44
Tnfsf4P43488 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.29□□□□□ -0.44
Tnfsf4P43488 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf4P43488 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.29□□□□□ -0.44
Tnfsf4P43488 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf4P43488 Gm26035-201ENSMUST00000083065 308 ntBASIC12.29□□□□□ -0.44
Tnfsf4P43488 Mir339-201ENSMUST00000083659 96 ntBASIC12.29□□□□□ -0.44
Tnfsf4P43488 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Tnfsf4P43488 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Tnfsf4P43488 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf4P43488 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf4P43488 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf4P43488 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf4P43488 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf4P43488 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfsf4P43488 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf4P43488 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf4P43488 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Tnfsf4P43488 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf4P43488 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf4P43488 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Tnfsf4P43488 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.28□□□□□ -0.44
Tnfsf4P43488 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf4P43488 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.28□□□□□ -0.44
Tnfsf4P43488 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Tnfsf4P43488 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Tnfsf4P43488 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.28□□□□□ -0.44
Tnfsf4P43488 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.28□□□□□ -0.44
Tnfsf4P43488 Gm7488-201ENSMUST00000117148 684 ntBASIC12.28□□□□□ -0.44
Tnfsf4P43488 Gm11618-201ENSMUST00000117946 267 ntBASIC12.28□□□□□ -0.44
Tnfsf4P43488 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.28□□□□□ -0.44
Tnfsf4P43488 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Tnfsf4P43488 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.28□□□□□ -0.44
Tnfsf4P43488 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf4P43488 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Tnfsf4P43488 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf4P43488 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.28□□□□□ -0.44
Tnfsf4P43488 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf4P43488 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf4P43488 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.28□□□□□ -0.44
Tnfsf4P43488 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf4P43488 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.28□□□□□ -0.44
Tnfsf4P43488 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf4P43488 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf4P43488 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf4P43488 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf4P43488 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf4P43488 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfsf4P43488 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Tnfsf4P43488 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms