Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chd1P40201 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Chd1P40201 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Chd1P40201 Gm11660-201ENSMUST00000120955 412 ntBASIC18.66■□□□□ 0.58
Chd1P40201 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chd1P40201 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC18.66■□□□□ 0.58
Chd1P40201 Gm26982-201ENSMUST00000182250 1151 ntBASIC18.66■□□□□ 0.58
Chd1P40201 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC18.66■□□□□ 0.58
Chd1P40201 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Chd1P40201 AC122346.3-201ENSMUST00000223983 306 ntBASIC18.66■□□□□ 0.58
Chd1P40201 Gm23105-201ENSMUST00000083719 134 ntBASIC18.66■□□□□ 0.58
Chd1P40201 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Chd1P40201 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Chd1P40201 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chd1P40201 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chd1P40201 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chd1P40201 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chd1P40201 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chd1P40201 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Chd1P40201 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chd1P40201 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chd1P40201 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chd1P40201 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chd1P40201 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Chd1P40201 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Chd1P40201 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chd1P40201 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Chd1P40201 Gm18798-201ENSMUST00000187264 1700 ntBASIC18.66■□□□□ 0.58
Chd1P40201 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Chd1P40201 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Chd1P40201 Gm15615-201ENSMUST00000118876 198 ntBASIC18.66■□□□□ 0.58
Chd1P40201 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Chd1P40201 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chd1P40201 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chd1P40201 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Chd1P40201 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Chd1P40201 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC18.66■□□□□ 0.58
Chd1P40201 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC18.66■□□□□ 0.58
Chd1P40201 AC114645.1-201ENSMUST00000215831 187 ntBASIC18.66■□□□□ 0.58
Chd1P40201 Gm2553-201ENSMUST00000215986 605 ntBASIC18.66■□□□□ 0.58
Chd1P40201 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.65■□□□□ 0.58
Chd1P40201 AC164107.1-201ENSMUST00000227730 2161 ntBASIC18.65■□□□□ 0.58
Chd1P40201 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chd1P40201 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chd1P40201 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chd1P40201 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC18.65■□□□□ 0.58
Chd1P40201 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Chd1P40201 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Chd1P40201 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chd1P40201 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Chd1P40201 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chd1P40201 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC18.65■□□□□ 0.58
Chd1P40201 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC18.65■□□□□ 0.58
Chd1P40201 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Chd1P40201 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC18.65■□□□□ 0.58
Chd1P40201 Gm39288-201ENSMUST00000210554 446 ntBASIC18.65■□□□□ 0.58
Chd1P40201 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chd1P40201 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chd1P40201 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chd1P40201 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Chd1P40201 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chd1P40201 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chd1P40201 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC18.65■□□□□ 0.58
Chd1P40201 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chd1P40201 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Chd1P40201 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Chd1P40201 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
Chd1P40201 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Chd1P40201 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chd1P40201 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chd1P40201 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chd1P40201 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chd1P40201 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Chd1P40201 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Chd1P40201 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Chd1P40201 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Chd1P40201 Gm12663-201ENSMUST00000118481 958 ntBASIC18.64■□□□□ 0.57
Chd1P40201 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Chd1P40201 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC18.64■□□□□ 0.57
Chd1P40201 Gm34379-201ENSMUST00000195036 290 ntBASIC18.64■□□□□ 0.57
Chd1P40201 Trav11n-201ENSMUST00000200113 343 ntBASIC18.64■□□□□ 0.57
Chd1P40201 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chd1P40201 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chd1P40201 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chd1P40201 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chd1P40201 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chd1P40201 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Chd1P40201 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chd1P40201 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chd1P40201 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chd1P40201 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Chd1P40201 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Chd1P40201 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chd1P40201 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Chd1P40201 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Chd1P40201 Gm6322-201ENSMUST00000118789 1004 ntBASIC18.63■□□□□ 0.57
Chd1P40201 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Chd1P40201 Gm22846-201ENSMUST00000157706 270 ntBASIC18.63■□□□□ 0.57
Chd1P40201 Mir6941-201ENSMUST00000184711 59 ntBASIC18.63■□□□□ 0.57
Chd1P40201 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms