Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nedd8P29595 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nedd8P29595 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Nedd8P29595 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nedd8P29595 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC11.75□□□□□ -0.53
Nedd8P29595 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nedd8P29595 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nedd8P29595 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nedd8P29595 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nedd8P29595 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nedd8P29595 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.75□□□□□ -0.53
Nedd8P29595 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nedd8P29595 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nedd8P29595 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nedd8P29595 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nedd8P29595 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nedd8P29595 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.75□□□□□ -0.53
Nedd8P29595 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.75□□□□□ -0.53
Nedd8P29595 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.75□□□□□ -0.53
Nedd8P29595 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.75□□□□□ -0.53
Nedd8P29595 Gm12403-201ENSMUST00000121384 959 ntBASIC11.75□□□□□ -0.53
Nedd8P29595 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC11.75□□□□□ -0.53
Nedd8P29595 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.75□□□□□ -0.53
Nedd8P29595 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.75□□□□□ -0.53
Nedd8P29595 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.75□□□□□ -0.53
Nedd8P29595 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.75□□□□□ -0.53
Nedd8P29595 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.75□□□□□ -0.53
Nedd8P29595 Mir8098-201ENSMUST00000184011 137 ntBASIC11.75□□□□□ -0.53
Nedd8P29595 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC11.75□□□□□ -0.53
Nedd8P29595 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC11.75□□□□□ -0.53
Nedd8P29595 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC11.75□□□□□ -0.53
Nedd8P29595 Gm17330-201ENSMUST00000221047 165 ntBASIC11.75□□□□□ -0.53
Nedd8P29595 Gm16476-201ENSMUST00000221544 139 ntBASIC11.75□□□□□ -0.53
Nedd8P29595 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nedd8P29595 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Nedd8P29595 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Nedd8P29595 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nedd8P29595 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.75□□□□□ -0.53
Nedd8P29595 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Nedd8P29595 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nedd8P29595 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.75□□□□□ -0.53
Nedd8P29595 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nedd8P29595 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.75□□□□□ -0.53
Nedd8P29595 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nedd8P29595 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Nedd8P29595 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nedd8P29595 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.75□□□□□ -0.53
Nedd8P29595 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Nedd8P29595 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nedd8P29595 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nedd8P29595 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Nedd8P29595 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nedd8P29595 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nedd8P29595 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nedd8P29595 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nedd8P29595 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nedd8P29595 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Nedd8P29595 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nedd8P29595 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nedd8P29595 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.74□□□□□ -0.53
Nedd8P29595 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nedd8P29595 Gm14140-201ENSMUST00000119999 995 ntBASIC11.74□□□□□ -0.53
Nedd8P29595 Gm12350-201ENSMUST00000121208 462 ntBASIC11.74□□□□□ -0.53
Nedd8P29595 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nedd8P29595 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nedd8P29595 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC11.74□□□□□ -0.53
Nedd8P29595 Gm18206-201ENSMUST00000207027 926 ntBASIC11.74□□□□□ -0.53
Nedd8P29595 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nedd8P29595 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nedd8P29595 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nedd8P29595 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nedd8P29595 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nedd8P29595 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nedd8P29595 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.74□□□□□ -0.53
Nedd8P29595 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nedd8P29595 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.74□□□□□ -0.53
Nedd8P29595 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nedd8P29595 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nedd8P29595 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nedd8P29595 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nedd8P29595 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nedd8P29595 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nedd8P29595 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Nedd8P29595 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Nedd8P29595 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Nedd8P29595 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Nedd8P29595 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC11.73□□□□□ -0.53
Nedd8P29595 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nedd8P29595 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nedd8P29595 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nedd8P29595 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nedd8P29595 Gm12428-201ENSMUST00000119844 727 ntBASIC11.73□□□□□ -0.53
Nedd8P29595 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nedd8P29595 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nedd8P29595 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC11.73□□□□□ -0.53
Nedd8P29595 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nedd8P29595 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC11.73□□□□□ -0.53
Nedd8P29595 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nedd8P29595 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nedd8P29595 Gm4804-201ENSMUST00000182234 999 ntBASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms