Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf1bP25119 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf1bP25119 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf1bP25119 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf1bP25119 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf1bP25119 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf1bP25119 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Tnfrsf1bP25119 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf1bP25119 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf1bP25119 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf1bP25119 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf1bP25119 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf1bP25119 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf1bP25119 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf1bP25119 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 Gm22018-201ENSMUST00000104357 131 ntBASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Tnfrsf1bP25119 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 Gm13392-201ENSMUST00000117708 150 ntBASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 Gm3890-201ENSMUST00000182416 207 ntBASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Tnfrsf1bP25119 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms