Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TP20293 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TP20293 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
TP20293 Gm13123-201ENSMUST00000122173 492 ntBASIC12.03□□□□□ -0.48
TP20293 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.03□□□□□ -0.48
TP20293 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
TP20293 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TP20293 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.03□□□□□ -0.48
TP20293 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
TP20293 Gm27331-201ENSMUST00000183705 60 ntBASIC12.03□□□□□ -0.48
TP20293 Gm29127-201ENSMUST00000188304 517 ntBASIC12.03□□□□□ -0.48
TP20293 Gm28693-202ENSMUST00000190758 331 ntBASIC12.03□□□□□ -0.48
TP20293 Gm18187-201ENSMUST00000196476 984 ntBASIC12.03□□□□□ -0.48
TP20293 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TP20293 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TP20293 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TP20293 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TP20293 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TP20293 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TP20293 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TP20293 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TP20293 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.03□□□□□ -0.48
TP20293 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TP20293 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TP20293 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TP20293 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
TP20293 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TP20293 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TP20293 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TP20293 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TP20293 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TP20293 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TP20293 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TP20293 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TP20293 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TP20293 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
TP20293 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TP20293 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TP20293 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
TP20293 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
TP20293 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
TP20293 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.02□□□□□ -0.48
TP20293 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.02□□□□□ -0.48
TP20293 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
TP20293 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TP20293 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
TP20293 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TP20293 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.02□□□□□ -0.48
TP20293 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TP20293 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
TP20293 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
TP20293 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
TP20293 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TP20293 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
TP20293 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TP20293 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.02□□□□□ -0.49
TP20293 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
TP20293 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
TP20293 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TP20293 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.02□□□□□ -0.49
TP20293 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TP20293 Gm4984-201ENSMUST00000115987 360 ntBASIC12.02□□□□□ -0.49
TP20293 Gm12390-201ENSMUST00000117897 397 ntBASIC12.02□□□□□ -0.49
TP20293 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.02□□□□□ -0.49
TP20293 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TP20293 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.49
TP20293 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.02□□□□□ -0.49
TP20293 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TP20293 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
TP20293 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.02□□□□□ -0.49
TP20293 Gm29705-201ENSMUST00000212598 474 ntBASIC12.02□□□□□ -0.49
TP20293 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TP20293 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
TP20293 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
TP20293 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TP20293 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TP20293 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
TP20293 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TP20293 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TP20293 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.02□□□□□ -0.49
TP20293 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TP20293 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TP20293 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.01□□□□□ -0.49
TP20293 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
TP20293 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TP20293 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TP20293 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.01□□□□□ -0.49
TP20293 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TP20293 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.01□□□□□ -0.49
TP20293 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
TP20293 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.01□□□□□ -0.49
TP20293 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
TP20293 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.01□□□□□ -0.49
TP20293 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TP20293 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
TP20293 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TP20293 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
TP20293 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
TP20293 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TP20293 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms