Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hmgn1P18608 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Hmgn1P18608 Gm23935-201ENSMUST00000102303 57 ntBASIC11.66□□□□□ -0.54
Hmgn1P18608 Gm24270-201ENSMUST00000102326 57 ntBASIC11.66□□□□□ -0.54
Hmgn1P18608 Gm5687-201ENSMUST00000118252 640 ntBASIC11.66□□□□□ -0.54
Hmgn1P18608 Gm15487-201ENSMUST00000122373 465 ntBASIC11.66□□□□□ -0.54
Hmgn1P18608 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Hmgn1P18608 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC11.66□□□□□ -0.54
Hmgn1P18608 Gm24245-201ENSMUST00000157318 57 ntBASIC11.66□□□□□ -0.54
Hmgn1P18608 Gm27989-201ENSMUST00000184721 107 ntBASIC11.66□□□□□ -0.54
Hmgn1P18608 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.66□□□□□ -0.54
Hmgn1P18608 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.66□□□□□ -0.54
Hmgn1P18608 Gm44397-201ENSMUST00000195950 113 ntBASIC11.66□□□□□ -0.54
Hmgn1P18608 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.66□□□□□ -0.54
Hmgn1P18608 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hmgn1P18608 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hmgn1P18608 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hmgn1P18608 Gm16372-201ENSMUST00000073088 450 ntBASIC11.66□□□□□ -0.54
Hmgn1P18608 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Hmgn1P18608 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Hmgn1P18608 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hmgn1P18608 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hmgn1P18608 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.66□□□□□ -0.54
Hmgn1P18608 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hmgn1P18608 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hmgn1P18608 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hmgn1P18608 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Hmgn1P18608 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hmgn1P18608 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hmgn1P18608 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Hmgn1P18608 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hmgn1P18608 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hmgn1P18608 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Hmgn1P18608 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hmgn1P18608 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hmgn1P18608 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Hmgn1P18608 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hmgn1P18608 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hmgn1P18608 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hmgn1P18608 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hmgn1P18608 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.65□□□□□ -0.54
Hmgn1P18608 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Hmgn1P18608 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hmgn1P18608 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Hmgn1P18608 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hmgn1P18608 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.65□□□□□ -0.54
Hmgn1P18608 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hmgn1P18608 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Hmgn1P18608 Gm14921-201ENSMUST00000118643 908 ntBASIC11.65□□□□□ -0.54
Hmgn1P18608 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hmgn1P18608 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.65□□□□□ -0.54
Hmgn1P18608 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.65□□□□□ -0.54
Hmgn1P18608 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Hmgn1P18608 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.65□□□□□ -0.54
Hmgn1P18608 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.65□□□□□ -0.54
Hmgn1P18608 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.65□□□□□ -0.54
Hmgn1P18608 Gm6983-201ENSMUST00000214912 628 ntBASIC11.65□□□□□ -0.54
Hmgn1P18608 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.65□□□□□ -0.54
Hmgn1P18608 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Hmgn1P18608 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Hmgn1P18608 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hmgn1P18608 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hmgn1P18608 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hmgn1P18608 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Hmgn1P18608 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.65□□□□□ -0.55
Hmgn1P18608 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Hmgn1P18608 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.55
Hmgn1P18608 Paupar-201ENSMUST00000194826 3482 ntBASIC11.65□□□□□ -0.55
Hmgn1P18608 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hmgn1P18608 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hmgn1P18608 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hmgn1P18608 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Hmgn1P18608 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hmgn1P18608 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.64□□□□□ -0.55
Hmgn1P18608 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Hmgn1P18608 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hmgn1P18608 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hmgn1P18608 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hmgn1P18608 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Hmgn1P18608 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.64□□□□□ -0.55
Hmgn1P18608 Mir7684-201ENSMUST00000183858 60 ntBASIC11.64□□□□□ -0.55
Hmgn1P18608 Gm10576-201ENSMUST00000191927 825 ntBASIC11.64□□□□□ -0.55
Hmgn1P18608 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.64□□□□□ -0.55
Hmgn1P18608 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.64□□□□□ -0.55
Hmgn1P18608 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.64□□□□□ -0.55
Hmgn1P18608 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
Hmgn1P18608 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.64□□□□□ -0.55
Hmgn1P18608 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hmgn1P18608 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Hmgn1P18608 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Hmgn1P18608 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hmgn1P18608 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hmgn1P18608 Mir339-201ENSMUST00000083659 96 ntBASIC11.64□□□□□ -0.55
Hmgn1P18608 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.64□□□□□ -0.55
Hmgn1P18608 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hmgn1P18608 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hmgn1P18608 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Hmgn1P18608 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Hmgn1P18608 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hmgn1P18608 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms