Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm27839-201ENSMUST00000184242 106 ntBASIC12.17□□□□□ -0.46
Lire1P11260 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Lire1P11260 Gm2495-201ENSMUST00000191160 466 ntBASIC12.17□□□□□ -0.46
Lire1P11260 Gm29741-201ENSMUST00000192667 421 ntBASIC12.17□□□□□ -0.46
Lire1P11260 Gm19078-201ENSMUST00000206311 727 ntBASIC12.17□□□□□ -0.46
Lire1P11260 Gm8463-201ENSMUST00000208573 613 ntBASIC12.17□□□□□ -0.46
Lire1P11260 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.17□□□□□ -0.46
Lire1P11260 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lire1P11260 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lire1P11260 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Lire1P11260 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lire1P11260 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lire1P11260 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lire1P11260 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Lire1P11260 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lire1P11260 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lire1P11260 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lire1P11260 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lire1P11260 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lire1P11260 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lire1P11260 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lire1P11260 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lire1P11260 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Lire1P11260 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lire1P11260 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lire1P11260 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Lire1P11260 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lire1P11260 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lire1P11260 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.16□□□□□ -0.46
Lire1P11260 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.16□□□□□ -0.46
Lire1P11260 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.16□□□□□ -0.46
Lire1P11260 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lire1P11260 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Lire1P11260 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lire1P11260 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lire1P11260 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Lire1P11260 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.16□□□□□ -0.46
Lire1P11260 Gm11524-201ENSMUST00000119349 807 ntBASIC12.16□□□□□ -0.46
Lire1P11260 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lire1P11260 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.16□□□□□ -0.46
Lire1P11260 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.16□□□□□ -0.46
Lire1P11260 Gm27772-201ENSMUST00000184900 187 ntBASIC12.16□□□□□ -0.46
Lire1P11260 Mir6420-201ENSMUST00000185032 102 ntBASIC12.16□□□□□ -0.46
Lire1P11260 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.16□□□□□ -0.46
Lire1P11260 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.16□□□□□ -0.46
Lire1P11260 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.16□□□□□ -0.46
Lire1P11260 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lire1P11260 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lire1P11260 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lire1P11260 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lire1P11260 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.16□□□□□ -0.46
Lire1P11260 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lire1P11260 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Lire1P11260 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lire1P11260 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lire1P11260 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Lire1P11260 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lire1P11260 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lire1P11260 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Lire1P11260 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lire1P11260 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lire1P11260 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.16□□□□□ -0.46
Lire1P11260 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lire1P11260 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lire1P11260 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Lire1P11260 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lire1P11260 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lire1P11260 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lire1P11260 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Lire1P11260 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lire1P11260 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.15□□□□□ -0.46
Lire1P11260 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lire1P11260 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Lire1P11260 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lire1P11260 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Lire1P11260 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lire1P11260 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lire1P11260 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lire1P11260 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Lire1P11260 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lire1P11260 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Lire1P11260 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lire1P11260 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lire1P11260 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.15□□□□□ -0.46
Lire1P11260 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.15□□□□□ -0.46
Lire1P11260 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.15□□□□□ -0.46
Lire1P11260 Gm15429-201ENSMUST00000151268 798 ntBASIC12.15□□□□□ -0.46
Lire1P11260 Gm24420-201ENSMUST00000176676 59 ntBASIC12.15□□□□□ -0.46
Lire1P11260 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.15□□□□□ -0.46
Lire1P11260 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.15□□□□□ -0.46
Lire1P11260 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.15□□□□□ -0.46
Lire1P11260 Gm45331-201ENSMUST00000209868 554 ntBASIC12.15□□□□□ -0.46
Lire1P11260 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lire1P11260 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.15□□□□□ -0.46
Lire1P11260 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lire1P11260 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lire1P11260 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Lire1P11260 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lire1P11260 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lire1P11260 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms