Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC10.72□□□□□ -0.69
Hoxa3P02831 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa3P02831 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa3P02831 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC10.72□□□□□ -0.69
Hoxa3P02831 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC10.72□□□□□ -0.69
Hoxa3P02831 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa3P02831 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa3P02831 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Hoxa3P02831 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Hoxa3P02831 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa3P02831 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa3P02831 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa3P02831 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa3P02831 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa3P02831 AC125108.1-201ENSMUST00000218986 2330 ntBASIC10.72□□□□□ -0.69
Hoxa3P02831 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa3P02831 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa3P02831 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hoxa3P02831 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa3P02831 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa3P02831 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa3P02831 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa3P02831 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa3P02831 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa3P02831 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa3P02831 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa3P02831 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa3P02831 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa3P02831 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
Hoxa3P02831 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa3P02831 Gm13786-201ENSMUST00000122371 333 ntBASIC10.71□□□□□ -0.69
Hoxa3P02831 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa3P02831 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa3P02831 Gm42627-201ENSMUST00000197347 224 ntBASIC10.71□□□□□ -0.69
Hoxa3P02831 Gm43677-201ENSMUST00000198098 2378 ntBASIC10.71□□□□□ -0.69
Hoxa3P02831 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa3P02831 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.71□□□□□ -0.69
Hoxa3P02831 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa3P02831 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa3P02831 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.71□□□□□ -0.69
Hoxa3P02831 AC101945.2-201ENSMUST00000227886 1377 ntBASIC10.71□□□□□ -0.69
Hoxa3P02831 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa3P02831 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa3P02831 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa3P02831 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.69
Hoxa3P02831 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa3P02831 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Hoxa3P02831 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa3P02831 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa3P02831 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa3P02831 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa3P02831 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hoxa3P02831 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Hoxa3P02831 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Hoxa3P02831 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Hoxa3P02831 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.7
Hoxa3P02831 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Hoxa3P02831 Gm45743-201ENSMUST00000212701 2795 ntBASIC10.71□□□□□ -0.7
Hoxa3P02831 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Hoxa3P02831 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hoxa3P02831 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC10.7□□□□□ -0.7
Hoxa3P02831 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hoxa3P02831 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hoxa3P02831 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hoxa3P02831 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hoxa3P02831 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hoxa3P02831 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC10.7□□□□□ -0.7
Hoxa3P02831 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hoxa3P02831 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hoxa3P02831 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hoxa3P02831 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hoxa3P02831 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hoxa3P02831 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
Hoxa3P02831 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hoxa3P02831 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hoxa3P02831 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hoxa3P02831 Snord83b-201ENSMUST00000104546 94 ntBASIC10.7□□□□□ -0.7
Hoxa3P02831 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.7□□□□□ -0.7
Hoxa3P02831 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Hoxa3P02831 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hoxa3P02831 Gm7584-201ENSMUST00000175829 940 ntBASIC10.7□□□□□ -0.7
Hoxa3P02831 Gm29396-201ENSMUST00000185659 716 ntBASIC10.7□□□□□ -0.7
Hoxa3P02831 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hoxa3P02831 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC10.7□□□□□ -0.7
Hoxa3P02831 Gm6334-201ENSMUST00000207083 228 ntBASIC10.7□□□□□ -0.7
Hoxa3P02831 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC10.7□□□□□ -0.7
Hoxa3P02831 Gm18935-201ENSMUST00000212692 664 ntBASIC10.7□□□□□ -0.7
Hoxa3P02831 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hoxa3P02831 Gm8227-201ENSMUST00000223306 571 ntBASIC10.7□□□□□ -0.7
Hoxa3P02831 Cts7-204ENSMUST00000225321 1257 ntBASIC10.7□□□□□ -0.7
Hoxa3P02831 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Hoxa3P02831 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Hoxa3P02831 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Hoxa3P02831 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.7□□□□□ -0.7
Hoxa3P02831 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Hoxa3P02831 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hoxa3P02831 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hoxa3P02831 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hoxa3P02831 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hoxa3P02831 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms