Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cops4O88544 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cops4O88544 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cops4O88544 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.78□□□□□ -0.52
Cops4O88544 Gm12151-201ENSMUST00000121374 290 ntBASIC11.78□□□□□ -0.52
Cops4O88544 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Cops4O88544 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC11.78□□□□□ -0.52
Cops4O88544 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cops4O88544 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cops4O88544 Mir8102-201ENSMUST00000184148 139 ntBASIC11.78□□□□□ -0.52
Cops4O88544 Gm27838-201ENSMUST00000184829 128 ntBASIC11.78□□□□□ -0.52
Cops4O88544 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.78□□□□□ -0.52
Cops4O88544 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC11.78□□□□□ -0.52
Cops4O88544 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cops4O88544 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC11.78□□□□□ -0.52
Cops4O88544 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cops4O88544 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cops4O88544 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cops4O88544 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cops4O88544 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cops4O88544 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Cops4O88544 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC11.78□□□□□ -0.52
Cops4O88544 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.78□□□□□ -0.52
Cops4O88544 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.78□□□□□ -0.52
Cops4O88544 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cops4O88544 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cops4O88544 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.78□□□□□ -0.52
Cops4O88544 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cops4O88544 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cops4O88544 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cops4O88544 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Cops4O88544 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cops4O88544 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Cops4O88544 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cops4O88544 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cops4O88544 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.52
Cops4O88544 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Cops4O88544 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cops4O88544 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Cops4O88544 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Cops4O88544 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Cops4O88544 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Cops4O88544 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cops4O88544 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cops4O88544 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cops4O88544 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cops4O88544 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cops4O88544 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.77□□□□□ -0.52
Cops4O88544 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cops4O88544 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.77□□□□□ -0.53
Cops4O88544 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cops4O88544 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cops4O88544 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Cops4O88544 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.77□□□□□ -0.53
Cops4O88544 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cops4O88544 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.77□□□□□ -0.53
Cops4O88544 Gm15487-201ENSMUST00000122373 465 ntBASIC11.77□□□□□ -0.53
Cops4O88544 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.77□□□□□ -0.53
Cops4O88544 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Cops4O88544 Mir7684-201ENSMUST00000183858 60 ntBASIC11.77□□□□□ -0.53
Cops4O88544 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.77□□□□□ -0.53
Cops4O88544 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.77□□□□□ -0.53
Cops4O88544 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.77□□□□□ -0.53
Cops4O88544 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.77□□□□□ -0.53
Cops4O88544 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cops4O88544 Gm5867-201ENSMUST00000063197 592 ntBASIC11.77□□□□□ -0.53
Cops4O88544 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cops4O88544 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cops4O88544 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Cops4O88544 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cops4O88544 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.77□□□□□ -0.53
Cops4O88544 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cops4O88544 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cops4O88544 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cops4O88544 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.77□□□□□ -0.53
Cops4O88544 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cops4O88544 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cops4O88544 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cops4O88544 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cops4O88544 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.77□□□□□ -0.53
Cops4O88544 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cops4O88544 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cops4O88544 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cops4O88544 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cops4O88544 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.76□□□□□ -0.53
Cops4O88544 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cops4O88544 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cops4O88544 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cops4O88544 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Cops4O88544 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.76□□□□□ -0.53
Cops4O88544 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cops4O88544 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cops4O88544 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.76□□□□□ -0.53
Cops4O88544 Gm12485-201ENSMUST00000119641 291 ntBASIC11.76□□□□□ -0.53
Cops4O88544 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cops4O88544 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cops4O88544 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Cops4O88544 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.76□□□□□ -0.53
Cops4O88544 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.76□□□□□ -0.53
Cops4O88544 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms