Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Gm9333-201ENSMUST00000205452 1323 ntBASIC13.28□□□□□ -0.28
Ttc3O88196 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ttc3O88196 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ttc3O88196 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ttc3O88196 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ttc3O88196 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ttc3O88196 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC13.28□□□□□ -0.28
Ttc3O88196 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ttc3O88196 Rmrp-201ENSMUST00000157463 271 ntBASIC13.28□□□□□ -0.28
Ttc3O88196 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ttc3O88196 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ttc3O88196 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ttc3O88196 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.28□□□□□ -0.28
Ttc3O88196 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ttc3O88196 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ttc3O88196 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ttc3O88196 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ttc3O88196 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ttc3O88196 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ttc3O88196 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC13.28□□□□□ -0.28
Ttc3O88196 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ttc3O88196 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ttc3O88196 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ttc3O88196 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.28□□□□□ -0.28
Ttc3O88196 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ttc3O88196 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ttc3O88196 Gm43289-201ENSMUST00000200537 1475 ntBASIC13.28□□□□□ -0.28
Ttc3O88196 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ttc3O88196 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ttc3O88196 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ttc3O88196 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ttc3O88196 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ttc3O88196 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.27□□□□□ -0.28
Ttc3O88196 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ttc3O88196 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC13.27□□□□□ -0.28
Ttc3O88196 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC13.27□□□□□ -0.28
Ttc3O88196 Gm13996-201ENSMUST00000118456 430 ntBASIC13.27□□□□□ -0.28
Ttc3O88196 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ttc3O88196 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ttc3O88196 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC13.27□□□□□ -0.28
Ttc3O88196 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ttc3O88196 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ttc3O88196 Gm32999-201ENSMUST00000192693 562 ntBASIC13.27□□□□□ -0.28
Ttc3O88196 Gm44958-201ENSMUST00000203734 736 ntBASIC13.27□□□□□ -0.28
Ttc3O88196 Gm44651-201ENSMUST00000207343 372 ntBASIC13.27□□□□□ -0.28
Ttc3O88196 Gm45433-201ENSMUST00000209386 247 ntBASIC13.27□□□□□ -0.28
Ttc3O88196 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.27□□□□□ -0.28
Ttc3O88196 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.27□□□□□ -0.28
Ttc3O88196 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ttc3O88196 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ttc3O88196 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Ttc3O88196 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ttc3O88196 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ttc3O88196 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Ttc3O88196 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ttc3O88196 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ttc3O88196 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ttc3O88196 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ttc3O88196 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Ttc3O88196 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ttc3O88196 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ttc3O88196 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ttc3O88196 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.27□□□□□ -0.29
Ttc3O88196 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ttc3O88196 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ttc3O88196 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC13.27□□□□□ -0.29
Ttc3O88196 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.27□□□□□ -0.29
Ttc3O88196 Mir3547-201ENSMUST00000175461 88 ntBASIC13.27□□□□□ -0.29
Ttc3O88196 Gm28450-201ENSMUST00000187349 638 ntBASIC13.27□□□□□ -0.29
Ttc3O88196 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ttc3O88196 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Ttc3O88196 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.27□□□□□ -0.29
Ttc3O88196 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.27□□□□□ -0.29
Ttc3O88196 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ttc3O88196 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ttc3O88196 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ttc3O88196 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ttc3O88196 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.26□□□□□ -0.29
Ttc3O88196 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.26□□□□□ -0.29
Ttc3O88196 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ttc3O88196 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ttc3O88196 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ttc3O88196 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ttc3O88196 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.26□□□□□ -0.29
Ttc3O88196 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.26□□□□□ -0.29
Ttc3O88196 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ttc3O88196 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ttc3O88196 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ttc3O88196 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Ttc3O88196 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC13.26□□□□□ -0.29
Ttc3O88196 Gm16481-201ENSMUST00000119074 1227 ntBASIC13.26□□□□□ -0.29
Ttc3O88196 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ttc3O88196 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC13.26□□□□□ -0.29
Ttc3O88196 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ttc3O88196 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC13.26□□□□□ -0.29
Ttc3O88196 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC13.26□□□□□ -0.29
Ttc3O88196 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC13.26□□□□□ -0.29
Ttc3O88196 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ttc3O88196 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ttc3O88196 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms