Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim55G3X8Y1 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim55G3X8Y1 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim55G3X8Y1 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trim55G3X8Y1 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim55G3X8Y1 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim55G3X8Y1 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim55G3X8Y1 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim55G3X8Y1 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trim55G3X8Y1 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trim55G3X8Y1 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trim55G3X8Y1 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trim55G3X8Y1 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Trim55G3X8Y1 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trim55G3X8Y1 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim55G3X8Y1 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim55G3X8Y1 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim55G3X8Y1 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.08□□□□□ -0.32
Trim55G3X8Y1 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim55G3X8Y1 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim55G3X8Y1 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim55G3X8Y1 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim55G3X8Y1 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim55G3X8Y1 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.08□□□□□ -0.32
Trim55G3X8Y1 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim55G3X8Y1 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim55G3X8Y1 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim55G3X8Y1 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim55G3X8Y1 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim55G3X8Y1 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.08□□□□□ -0.32
Trim55G3X8Y1 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim55G3X8Y1 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trim55G3X8Y1 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim55G3X8Y1 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trim55G3X8Y1 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim55G3X8Y1 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim55G3X8Y1 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Trim55G3X8Y1 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim55G3X8Y1 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trim55G3X8Y1 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim55G3X8Y1 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim55G3X8Y1 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim55G3X8Y1 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim55G3X8Y1 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim55G3X8Y1 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trim55G3X8Y1 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim55G3X8Y1 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim55G3X8Y1 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim55G3X8Y1 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim55G3X8Y1 BC043934-202ENSMUST00000185694 2356 ntBASIC13.07□□□□□ -0.32
Trim55G3X8Y1 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim55G3X8Y1 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim55G3X8Y1 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim55G3X8Y1 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Trim55G3X8Y1 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.07□□□□□ -0.32
Trim55G3X8Y1 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim55G3X8Y1 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim55G3X8Y1 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim55G3X8Y1 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim55G3X8Y1 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim55G3X8Y1 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Trim55G3X8Y1 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim55G3X8Y1 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim55G3X8Y1 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.07□□□□□ -0.32
Trim55G3X8Y1 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.07□□□□□ -0.32
Trim55G3X8Y1 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.07□□□□□ -0.32
Trim55G3X8Y1 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim55G3X8Y1 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim55G3X8Y1 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim55G3X8Y1 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim55G3X8Y1 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim55G3X8Y1 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim55G3X8Y1 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trim55G3X8Y1 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trim55G3X8Y1 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim55G3X8Y1 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim55G3X8Y1 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim55G3X8Y1 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim55G3X8Y1 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim55G3X8Y1 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim55G3X8Y1 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim55G3X8Y1 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.07□□□□□ -0.32
Trim55G3X8Y1 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim55G3X8Y1 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim55G3X8Y1 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim55G3X8Y1 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim55G3X8Y1 Gm37580-201ENSMUST00000192408 2800 ntBASIC13.07□□□□□ -0.32
Trim55G3X8Y1 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.07□□□□□ -0.32
Trim55G3X8Y1 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trim55G3X8Y1 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms