Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC11.98□□□□□ -0.49
Colca2F8VPY8 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.98□□□□□ -0.49
Colca2F8VPY8 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Gm34023-201ENSMUST00000195539 217 ntBASIC11.98□□□□□ -0.49
Colca2F8VPY8 Gm18893-201ENSMUST00000198416 943 ntBASIC11.98□□□□□ -0.49
Colca2F8VPY8 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Colca2F8VPY8 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.98□□□□□ -0.49
Colca2F8VPY8 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Colca2F8VPY8 AC171241.1-201ENSMUST00000228144 1166 ntBASIC11.98□□□□□ -0.49
Colca2F8VPY8 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Gm10288-201ENSMUST00000084614 537 ntBASIC11.98□□□□□ -0.49
Colca2F8VPY8 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.98□□□□□ -0.49
Colca2F8VPY8 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Colca2F8VPY8 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Colca2F8VPY8 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.97□□□□□ -0.49
Colca2F8VPY8 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Colca2F8VPY8 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Colca2F8VPY8 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Colca2F8VPY8 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Colca2F8VPY8 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Colca2F8VPY8 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.97□□□□□ -0.49
Colca2F8VPY8 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.97□□□□□ -0.49
Colca2F8VPY8 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.97□□□□□ -0.49
Colca2F8VPY8 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Colca2F8VPY8 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.97□□□□□ -0.49
Colca2F8VPY8 Gm14585-201ENSMUST00000120713 634 ntBASIC11.97□□□□□ -0.49
Colca2F8VPY8 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Colca2F8VPY8 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Colca2F8VPY8 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Colca2F8VPY8 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC11.97□□□□□ -0.49
Colca2F8VPY8 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.97□□□□□ -0.49
Colca2F8VPY8 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Colca2F8VPY8 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Colca2F8VPY8 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Colca2F8VPY8 Mir7076-201ENSMUST00000183519 74 ntBASIC11.97□□□□□ -0.49
Colca2F8VPY8 Gm27530-201ENSMUST00000184096 98 ntBASIC11.97□□□□□ -0.49
Colca2F8VPY8 Gm28324-201ENSMUST00000187913 264 ntBASIC11.97□□□□□ -0.49
Colca2F8VPY8 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Colca2F8VPY8 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Colca2F8VPY8 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC11.97□□□□□ -0.49
Colca2F8VPY8 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.97□□□□□ -0.49
Colca2F8VPY8 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.97□□□□□ -0.49
Colca2F8VPY8 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC11.97□□□□□ -0.49
Colca2F8VPY8 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Colca2F8VPY8 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.97□□□□□ -0.49
Colca2F8VPY8 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Colca2F8VPY8 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Colca2F8VPY8 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Colca2F8VPY8 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Colca2F8VPY8 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Colca2F8VPY8 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Colca2F8VPY8 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Colca2F8VPY8 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Colca2F8VPY8 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Colca2F8VPY8 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Colca2F8VPY8 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Colca2F8VPY8 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Colca2F8VPY8 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Colca2F8VPY8 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Colca2F8VPY8 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Colca2F8VPY8 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Colca2F8VPY8 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.96□□□□□ -0.49
Colca2F8VPY8 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Colca2F8VPY8 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Colca2F8VPY8 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
Colca2F8VPY8 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Colca2F8VPY8 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Colca2F8VPY8 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Colca2F8VPY8 Gm24231-201ENSMUST00000104315 133 ntBASIC11.96□□□□□ -0.49
Colca2F8VPY8 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC11.96□□□□□ -0.49
Colca2F8VPY8 Gm11246-201ENSMUST00000120880 345 ntBASIC11.96□□□□□ -0.49
Colca2F8VPY8 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC11.96□□□□□ -0.49
Colca2F8VPY8 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Colca2F8VPY8 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC11.96□□□□□ -0.49
Colca2F8VPY8 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Colca2F8VPY8 Gm8492-201ENSMUST00000182375 987 ntBASIC11.96□□□□□ -0.49
Colca2F8VPY8 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Colca2F8VPY8 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC11.96□□□□□ -0.49
Colca2F8VPY8 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 557.2 ms