Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm7488-201ENSMUST00000117148 684 ntBASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm15678-201ENSMUST00000117573 960 ntBASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm5354-201ENSMUST00000182417 973 ntBASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm31326-201ENSMUST00000191856 1048 ntBASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm4971-201ENSMUST00000205991 1108 ntBASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 AC155258.1-201ENSMUST00000219303 253 ntBASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 CT025535.1-201ENSMUST00000227172 491 ntBASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Mir497b-201ENSMUST00000093601 125 ntBASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm43622-201ENSMUST00000200140 2019 ntBASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm6263-201ENSMUST00000120029 1342 ntBASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm45532-201ENSMUST00000210342 3620 ntBASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm43045-201ENSMUST00000198725 2095 ntBASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm5279-201ENSMUST00000199575 745 ntBASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 AC135669.1-201ENSMUST00000213585 412 ntBASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms