Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
PdfS4R2K0 Gm44401-201ENSMUST00000204462 2375 ntBASIC9.83□□□□□ -0.84
PdfS4R2K0 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
PdfS4R2K0 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
PdfS4R2K0 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
PdfS4R2K0 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
PdfS4R2K0 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
PdfS4R2K0 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
PdfS4R2K0 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
PdfS4R2K0 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
PdfS4R2K0 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
PdfS4R2K0 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
PdfS4R2K0 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
PdfS4R2K0 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC9.83□□□□□ -0.84
PdfS4R2K0 CT009757.3-201ENSMUST00000223367 2320 ntBASIC9.83□□□□□ -0.84
PdfS4R2K0 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
PdfS4R2K0 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
PdfS4R2K0 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
PdfS4R2K0 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
PdfS4R2K0 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC9.83□□□□□ -0.84
PdfS4R2K0 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
PdfS4R2K0 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
PdfS4R2K0 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
PdfS4R2K0 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
PdfS4R2K0 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
PdfS4R2K0 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PdfS4R2K0 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
PdfS4R2K0 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PdfS4R2K0 Gm38385-201ENSMUST00000194454 2351 ntBASIC9.82□□□□□ -0.84
PdfS4R2K0 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
PdfS4R2K0 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC9.82□□□□□ -0.84
PdfS4R2K0 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PdfS4R2K0 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PdfS4R2K0 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PdfS4R2K0 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
PdfS4R2K0 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PdfS4R2K0 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PdfS4R2K0 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PdfS4R2K0 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC9.82□□□□□ -0.84
PdfS4R2K0 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PdfS4R2K0 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC9.82□□□□□ -0.84
PdfS4R2K0 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PdfS4R2K0 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PdfS4R2K0 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PdfS4R2K0 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
PdfS4R2K0 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
PdfS4R2K0 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PdfS4R2K0 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
PdfS4R2K0 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PdfS4R2K0 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC9.82□□□□□ -0.84
PdfS4R2K0 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
PdfS4R2K0 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
PdfS4R2K0 Gm15770-201ENSMUST00000117498 584 ntBASIC9.82□□□□□ -0.84
PdfS4R2K0 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC9.82□□□□□ -0.84
PdfS4R2K0 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC9.82□□□□□ -0.84
PdfS4R2K0 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC9.82□□□□□ -0.84
PdfS4R2K0 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
PdfS4R2K0 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PdfS4R2K0 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
PdfS4R2K0 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC9.82□□□□□ -0.84
PdfS4R2K0 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
PdfS4R2K0 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
PdfS4R2K0 Gm7730-201ENSMUST00000212486 454 ntBASIC9.82□□□□□ -0.84
PdfS4R2K0 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PdfS4R2K0 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
PdfS4R2K0 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
PdfS4R2K0 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
PdfS4R2K0 Gm3695-201ENSMUST00000087222 1009 ntBASIC9.82□□□□□ -0.84
PdfS4R2K0 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
PdfS4R2K0 Gm3365-201ENSMUST00000216296 1480 ntBASIC9.82□□□□□ -0.84
PdfS4R2K0 Gm5989-201ENSMUST00000096092 2077 ntBASIC9.82□□□□□ -0.84
PdfS4R2K0 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
PdfS4R2K0 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
PdfS4R2K0 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
PdfS4R2K0 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
PdfS4R2K0 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
PdfS4R2K0 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
PdfS4R2K0 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PdfS4R2K0 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
PdfS4R2K0 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PdfS4R2K0 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
PdfS4R2K0 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
PdfS4R2K0 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
PdfS4R2K0 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
PdfS4R2K0 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC9.81□□□□□ -0.84
PdfS4R2K0 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
PdfS4R2K0 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
PdfS4R2K0 Gm9544-201ENSMUST00000223349 2482 ntBASIC9.81□□□□□ -0.84
PdfS4R2K0 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
PdfS4R2K0 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
PdfS4R2K0 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
PdfS4R2K0 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
PdfS4R2K0 AC154404.1-201ENSMUST00000223601 2077 ntBASIC9.81□□□□□ -0.84
PdfS4R2K0 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
PdfS4R2K0 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
PdfS4R2K0 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
PdfS4R2K0 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
PdfS4R2K0 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
PdfS4R2K0 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
PdfS4R2K0 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms