Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H2afb3S4R1G7 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H2afb3S4R1G7 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
H2afb3S4R1G7 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Gm14350-201ENSMUST00000116642 640 ntBASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Gm12859-201ENSMUST00000117834 427 ntBASIC11.51□□□□□ -0.57
H2afb3S4R1G7 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Gm15823-201ENSMUST00000064305 670 ntBASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
H2afb3S4R1G7 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb3S4R1G7 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb3S4R1G7 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb3S4R1G7 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb3S4R1G7 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.5□□□□□ -0.57
H2afb3S4R1G7 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb3S4R1G7 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.5□□□□□ -0.57
H2afb3S4R1G7 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb3S4R1G7 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
H2afb3S4R1G7 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb3S4R1G7 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb3S4R1G7 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb3S4R1G7 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
H2afb3S4R1G7 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.5□□□□□ -0.57
H2afb3S4R1G7 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.5□□□□□ -0.57
H2afb3S4R1G7 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.5□□□□□ -0.57
H2afb3S4R1G7 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.5□□□□□ -0.57
H2afb3S4R1G7 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb3S4R1G7 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.5□□□□□ -0.57
H2afb3S4R1G7 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb3S4R1G7 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.5□□□□□ -0.57
H2afb3S4R1G7 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb3S4R1G7 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb3S4R1G7 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
H2afb3S4R1G7 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb3S4R1G7 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.5□□□□□ -0.57
H2afb3S4R1G7 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb3S4R1G7 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb3S4R1G7 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb3S4R1G7 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
H2afb3S4R1G7 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.49□□□□□ -0.57
H2afb3S4R1G7 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb3S4R1G7 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb3S4R1G7 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb3S4R1G7 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
H2afb3S4R1G7 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb3S4R1G7 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.49□□□□□ -0.57
H2afb3S4R1G7 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb3S4R1G7 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb3S4R1G7 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb3S4R1G7 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb3S4R1G7 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.49□□□□□ -0.57
H2afb3S4R1G7 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb3S4R1G7 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb3S4R1G7 Gm7488-201ENSMUST00000117148 684 ntBASIC11.49□□□□□ -0.57
H2afb3S4R1G7 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms