Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cldn9Q9Z0S7 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.29□□□□□ -0.44
Cldn9Q9Z0S7 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cldn9Q9Z0S7 Gm11478-201ENSMUST00000117851 599 ntBASIC12.29□□□□□ -0.44
Cldn9Q9Z0S7 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.29□□□□□ -0.44
Cldn9Q9Z0S7 Gm24644-201ENSMUST00000157114 139 ntBASIC12.29□□□□□ -0.44
Cldn9Q9Z0S7 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cldn9Q9Z0S7 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.29□□□□□ -0.44
Cldn9Q9Z0S7 Gm22121-201ENSMUST00000175148 54 ntBASIC12.29□□□□□ -0.44
Cldn9Q9Z0S7 Gm27331-201ENSMUST00000183705 60 ntBASIC12.29□□□□□ -0.44
Cldn9Q9Z0S7 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.29□□□□□ -0.44
Cldn9Q9Z0S7 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Cldn9Q9Z0S7 Gm29705-201ENSMUST00000212598 474 ntBASIC12.29□□□□□ -0.44
Cldn9Q9Z0S7 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cldn9Q9Z0S7 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Cldn9Q9Z0S7 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cldn9Q9Z0S7 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cldn9Q9Z0S7 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cldn9Q9Z0S7 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.29□□□□□ -0.44
Cldn9Q9Z0S7 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cldn9Q9Z0S7 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cldn9Q9Z0S7 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cldn9Q9Z0S7 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cldn9Q9Z0S7 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cldn9Q9Z0S7 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cldn9Q9Z0S7 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cldn9Q9Z0S7 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.29□□□□□ -0.44
Cldn9Q9Z0S7 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cldn9Q9Z0S7 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cldn9Q9Z0S7 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.29□□□□□ -0.44
Cldn9Q9Z0S7 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 Gm27839-201ENSMUST00000184242 106 ntBASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 Gm5035-201ENSMUST00000215581 927 ntBASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn9Q9Z0S7 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cldn9Q9Z0S7 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cldn9Q9Z0S7 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cldn9Q9Z0S7 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cldn9Q9Z0S7 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cldn9Q9Z0S7 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cldn9Q9Z0S7 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cldn9Q9Z0S7 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.27□□□□□ -0.44
Cldn9Q9Z0S7 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Cldn9Q9Z0S7 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.27□□□□□ -0.45
Cldn9Q9Z0S7 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cldn9Q9Z0S7 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cldn9Q9Z0S7 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cldn9Q9Z0S7 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.27□□□□□ -0.45
Cldn9Q9Z0S7 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.27□□□□□ -0.45
Cldn9Q9Z0S7 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.27□□□□□ -0.45
Cldn9Q9Z0S7 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.27□□□□□ -0.45
Cldn9Q9Z0S7 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.27□□□□□ -0.45
Cldn9Q9Z0S7 Gm4271-201ENSMUST00000174444 973 ntBASIC12.27□□□□□ -0.45
Cldn9Q9Z0S7 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cldn9Q9Z0S7 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cldn9Q9Z0S7 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.27□□□□□ -0.45
Cldn9Q9Z0S7 Gm4768-201ENSMUST00000206199 686 ntBASIC12.27□□□□□ -0.45
Cldn9Q9Z0S7 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.27□□□□□ -0.45
Cldn9Q9Z0S7 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cldn9Q9Z0S7 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.27□□□□□ -0.45
Cldn9Q9Z0S7 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms