Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Mir686-201ENSMUST00000102174 109 ntBASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Gm13813-201ENSMUST00000120998 787 ntBASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Gm11978-201ENSMUST00000122315 466 ntBASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Gm22175-201ENSMUST00000175007 78 ntBASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Gm38297-201ENSMUST00000195122 1057 ntBASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Gm2756-201ENSMUST00000195851 400 ntBASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 AC151286.1-201ENSMUST00000198489 145 ntBASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Gm44771-201ENSMUST00000206975 626 ntBASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cx3cr1Q9Z0D9 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cx3cr1Q9Z0D9 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms