Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 AC131068.3-201ENSMUST00000228438 1456 ntBASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Gm12566-201ENSMUST00000121479 359 ntBASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Gm15279-201ENSMUST00000155593 288 ntBASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Gm24990-201ENSMUST00000157406 323 ntBASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Gm29705-201ENSMUST00000212598 474 ntBASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Gm10608-202ENSMUST00000213924 676 ntBASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Gm18329-201ENSMUST00000215832 589 ntBASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 H2-M10.4-201ENSMUST00000057502 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lhx6Q9R1R0 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lhx6Q9R1R0 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lhx6Q9R1R0 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lhx6Q9R1R0 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lhx6Q9R1R0 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
Lhx6Q9R1R0 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lhx6Q9R1R0 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 Gm11411-201ENSMUST00000117951 719 ntBASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 Gm14480-201ENSMUST00000118521 433 ntBASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 Selenot-ps-201ENSMUST00000119098 593 ntBASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 Gm11803-201ENSMUST00000119966 444 ntBASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 Gm12583-201ENSMUST00000120677 853 ntBASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 Gm38201-201ENSMUST00000192143 387 ntBASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 D530037P16Rik-201ENSMUST00000199255 1027 ntBASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 Gm6983-201ENSMUST00000214912 628 ntBASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms