Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf40aQ9R1C7 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.09□□□□□ -0.15
Prpf40aQ9R1C7 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Prpf40aQ9R1C7 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf40aQ9R1C7 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Prpf40aQ9R1C7 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf40aQ9R1C7 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf40aQ9R1C7 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf40aQ9R1C7 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Prpf40aQ9R1C7 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf40aQ9R1C7 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.09□□□□□ -0.15
Prpf40aQ9R1C7 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Prpf40aQ9R1C7 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Prpf40aQ9R1C7 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.08□□□□□ -0.15
Prpf40aQ9R1C7 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Prpf40aQ9R1C7 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Prpf40aQ9R1C7 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Prpf40aQ9R1C7 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.15
Prpf40aQ9R1C7 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.08□□□□□ -0.15
Prpf40aQ9R1C7 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.08□□□□□ -0.16
Prpf40aQ9R1C7 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Prpf40aQ9R1C7 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Prpf40aQ9R1C7 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf40aQ9R1C7 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf40aQ9R1C7 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf40aQ9R1C7 Gm12390-201ENSMUST00000117897 397 ntBASIC14.08□□□□□ -0.16
Prpf40aQ9R1C7 Gm11637-201ENSMUST00000120601 592 ntBASIC14.08□□□□□ -0.16
Prpf40aQ9R1C7 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.08□□□□□ -0.16
Prpf40aQ9R1C7 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.08□□□□□ -0.16
Prpf40aQ9R1C7 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.08□□□□□ -0.16
Prpf40aQ9R1C7 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Prpf40aQ9R1C7 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.08□□□□□ -0.16
Prpf40aQ9R1C7 Gm4271-201ENSMUST00000174444 973 ntBASIC14.08□□□□□ -0.16
Prpf40aQ9R1C7 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf40aQ9R1C7 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC14.08□□□□□ -0.16
Prpf40aQ9R1C7 Gm29127-201ENSMUST00000188304 517 ntBASIC14.08□□□□□ -0.16
Prpf40aQ9R1C7 Gm43433-201ENSMUST00000196573 481 ntBASIC14.08□□□□□ -0.16
Prpf40aQ9R1C7 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.08□□□□□ -0.16
Prpf40aQ9R1C7 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf40aQ9R1C7 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.08□□□□□ -0.16
Prpf40aQ9R1C7 AC125117.2-201ENSMUST00000228344 1140 ntBASIC14.08□□□□□ -0.16
Prpf40aQ9R1C7 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf40aQ9R1C7 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf40aQ9R1C7 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf40aQ9R1C7 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf40aQ9R1C7 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf40aQ9R1C7 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.08□□□□□ -0.16
Prpf40aQ9R1C7 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Prpf40aQ9R1C7 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf40aQ9R1C7 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf40aQ9R1C7 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.08□□□□□ -0.16
Prpf40aQ9R1C7 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC14.08□□□□□ -0.16
Prpf40aQ9R1C7 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.08□□□□□ -0.16
Prpf40aQ9R1C7 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf40aQ9R1C7 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf40aQ9R1C7 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf40aQ9R1C7 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.08□□□□□ -0.16
Prpf40aQ9R1C7 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf40aQ9R1C7 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Prpf40aQ9R1C7 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf40aQ9R1C7 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf40aQ9R1C7 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Prpf40aQ9R1C7 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf40aQ9R1C7 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf40aQ9R1C7 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf40aQ9R1C7 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf40aQ9R1C7 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf40aQ9R1C7 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf40aQ9R1C7 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf40aQ9R1C7 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf40aQ9R1C7 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf40aQ9R1C7 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.07□□□□□ -0.16
Prpf40aQ9R1C7 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf40aQ9R1C7 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf40aQ9R1C7 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf40aQ9R1C7 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf40aQ9R1C7 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf40aQ9R1C7 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf40aQ9R1C7 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
Prpf40aQ9R1C7 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC14.07□□□□□ -0.16
Prpf40aQ9R1C7 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf40aQ9R1C7 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf40aQ9R1C7 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf40aQ9R1C7 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf40aQ9R1C7 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf40aQ9R1C7 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Prpf40aQ9R1C7 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.07□□□□□ -0.16
Prpf40aQ9R1C7 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf40aQ9R1C7 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf40aQ9R1C7 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf40aQ9R1C7 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC14.07□□□□□ -0.16
Prpf40aQ9R1C7 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf40aQ9R1C7 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Prpf40aQ9R1C7 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf40aQ9R1C7 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Prpf40aQ9R1C7 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf40aQ9R1C7 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf40aQ9R1C7 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf40aQ9R1C7 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf40aQ9R1C7 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms