Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.28□□□□□ -0.44
Ube4bQ9ES00 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ube4bQ9ES00 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ube4bQ9ES00 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.28□□□□□ -0.44
Ube4bQ9ES00 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ube4bQ9ES00 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.28□□□□□ -0.44
Ube4bQ9ES00 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ube4bQ9ES00 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ube4bQ9ES00 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ube4bQ9ES00 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ube4bQ9ES00 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ube4bQ9ES00 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ube4bQ9ES00 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ube4bQ9ES00 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
Ube4bQ9ES00 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ube4bQ9ES00 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ube4bQ9ES00 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ube4bQ9ES00 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ube4bQ9ES00 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ube4bQ9ES00 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.27□□□□□ -0.44
Ube4bQ9ES00 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ube4bQ9ES00 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Ube4bQ9ES00 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ube4bQ9ES00 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ube4bQ9ES00 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ube4bQ9ES00 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ube4bQ9ES00 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ube4bQ9ES00 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ube4bQ9ES00 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ube4bQ9ES00 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ube4bQ9ES00 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ube4bQ9ES00 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ube4bQ9ES00 Gm8410-201ENSMUST00000117225 605 ntBASIC12.27□□□□□ -0.45
Ube4bQ9ES00 Gm15653-201ENSMUST00000119247 907 ntBASIC12.27□□□□□ -0.45
Ube4bQ9ES00 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ube4bQ9ES00 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ube4bQ9ES00 Gm28630-201ENSMUST00000187806 498 ntBASIC12.27□□□□□ -0.45
Ube4bQ9ES00 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Ube4bQ9ES00 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.27□□□□□ -0.45
Ube4bQ9ES00 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.27□□□□□ -0.45
Ube4bQ9ES00 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Ube4bQ9ES00 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ube4bQ9ES00 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ube4bQ9ES00 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ube4bQ9ES00 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ube4bQ9ES00 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.27□□□□□ -0.45
Ube4bQ9ES00 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ube4bQ9ES00 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ube4bQ9ES00 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ube4bQ9ES00 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ube4bQ9ES00 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.27□□□□□ -0.45
Ube4bQ9ES00 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ube4bQ9ES00 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ube4bQ9ES00 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ube4bQ9ES00 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ube4bQ9ES00 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ube4bQ9ES00 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.27□□□□□ -0.45
Ube4bQ9ES00 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ube4bQ9ES00 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ube4bQ9ES00 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ube4bQ9ES00 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ube4bQ9ES00 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ube4bQ9ES00 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube4bQ9ES00 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ube4bQ9ES00 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube4bQ9ES00 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube4bQ9ES00 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube4bQ9ES00 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube4bQ9ES00 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube4bQ9ES00 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube4bQ9ES00 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.26□□□□□ -0.45
Ube4bQ9ES00 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube4bQ9ES00 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ube4bQ9ES00 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube4bQ9ES00 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube4bQ9ES00 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ube4bQ9ES00 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube4bQ9ES00 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube4bQ9ES00 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube4bQ9ES00 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ube4bQ9ES00 Gm23935-201ENSMUST00000102303 57 ntBASIC12.26□□□□□ -0.45
Ube4bQ9ES00 Gm24270-201ENSMUST00000102326 57 ntBASIC12.26□□□□□ -0.45
Ube4bQ9ES00 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.26□□□□□ -0.45
Ube4bQ9ES00 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.26□□□□□ -0.45
Ube4bQ9ES00 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.26□□□□□ -0.45
Ube4bQ9ES00 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ube4bQ9ES00 Gm24245-201ENSMUST00000157318 57 ntBASIC12.26□□□□□ -0.45
Ube4bQ9ES00 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube4bQ9ES00 Gm25144-201ENSMUST00000179561 110 ntBASIC12.26□□□□□ -0.45
Ube4bQ9ES00 Gm25352-201ENSMUST00000179815 110 ntBASIC12.26□□□□□ -0.45
Ube4bQ9ES00 Gm43575-201ENSMUST00000196420 516 ntBASIC12.26□□□□□ -0.45
Ube4bQ9ES00 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.26□□□□□ -0.45
Ube4bQ9ES00 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube4bQ9ES00 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube4bQ9ES00 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ube4bQ9ES00 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ube4bQ9ES00 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube4bQ9ES00 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube4bQ9ES00 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube4bQ9ES00 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms