Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rtp4Q9ER80 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
Rtp4Q9ER80 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rtp4Q9ER80 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rtp4Q9ER80 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12□□□□□ -0.49
Rtp4Q9ER80 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rtp4Q9ER80 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rtp4Q9ER80 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rtp4Q9ER80 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Rtp4Q9ER80 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rtp4Q9ER80 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Rtp4Q9ER80 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rtp4Q9ER80 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rtp4Q9ER80 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Rtp4Q9ER80 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rtp4Q9ER80 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rtp4Q9ER80 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rtp4Q9ER80 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.99□□□□□ -0.49
Rtp4Q9ER80 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.99□□□□□ -0.49
Rtp4Q9ER80 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.99□□□□□ -0.49
Rtp4Q9ER80 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.99□□□□□ -0.49
Rtp4Q9ER80 Gm25927-201ENSMUST00000175058 117 ntBASIC11.99□□□□□ -0.49
Rtp4Q9ER80 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Rtp4Q9ER80 Gm43118-201ENSMUST00000199149 775 ntBASIC11.99□□□□□ -0.49
Rtp4Q9ER80 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.99□□□□□ -0.49
Rtp4Q9ER80 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rtp4Q9ER80 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rtp4Q9ER80 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.99□□□□□ -0.49
Rtp4Q9ER80 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rtp4Q9ER80 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.99□□□□□ -0.49
Rtp4Q9ER80 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rtp4Q9ER80 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.99□□□□□ -0.49
Rtp4Q9ER80 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rtp4Q9ER80 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rtp4Q9ER80 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.99□□□□□ -0.49
Rtp4Q9ER80 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Rtp4Q9ER80 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rtp4Q9ER80 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Rtp4Q9ER80 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rtp4Q9ER80 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rtp4Q9ER80 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rtp4Q9ER80 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Rtp4Q9ER80 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rtp4Q9ER80 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rtp4Q9ER80 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Gm14723-201ENSMUST00000118686 215 ntBASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Gm27501-201ENSMUST00000183599 107 ntBASIC11.98□□□□□ -0.49
Rtp4Q9ER80 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.98□□□□□ -0.49
Rtp4Q9ER80 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms