Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Chmp2aQ9DB34 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Chmp2aQ9DB34 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2aQ9DB34 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2aQ9DB34 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.34□□□□□ -0.27
Chmp2aQ9DB34 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.34□□□□□ -0.27
Chmp2aQ9DB34 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2aQ9DB34 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2aQ9DB34 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2aQ9DB34 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2aQ9DB34 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2aQ9DB34 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2aQ9DB34 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.34□□□□□ -0.27
Chmp2aQ9DB34 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2aQ9DB34 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2aQ9DB34 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.34□□□□□ -0.27
Chmp2aQ9DB34 Gm11637-201ENSMUST00000120601 592 ntBASIC13.34□□□□□ -0.27
Chmp2aQ9DB34 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2aQ9DB34 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.34□□□□□ -0.27
Chmp2aQ9DB34 Gm18041-201ENSMUST00000218210 618 ntBASIC13.34□□□□□ -0.27
Chmp2aQ9DB34 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2aQ9DB34 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2aQ9DB34 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2aQ9DB34 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.34□□□□□ -0.27
Chmp2aQ9DB34 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC13.34□□□□□ -0.27
Chmp2aQ9DB34 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2aQ9DB34 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.34□□□□□ -0.27
Chmp2aQ9DB34 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2aQ9DB34 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2aQ9DB34 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2aQ9DB34 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2aQ9DB34 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2aQ9DB34 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Chmp2aQ9DB34 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2aQ9DB34 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2aQ9DB34 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.34□□□□□ -0.27
Chmp2aQ9DB34 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2aQ9DB34 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2aQ9DB34 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2aQ9DB34 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Chmp2aQ9DB34 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Chmp2aQ9DB34 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Chmp2aQ9DB34 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Chmp2aQ9DB34 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.33□□□□□ -0.27
Chmp2aQ9DB34 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.33□□□□□ -0.28
Chmp2aQ9DB34 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp2aQ9DB34 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Chmp2aQ9DB34 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp2aQ9DB34 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp2aQ9DB34 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp2aQ9DB34 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Chmp2aQ9DB34 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Chmp2aQ9DB34 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Chmp2aQ9DB34 Gm8062-201ENSMUST00000139696 444 ntBASIC13.33□□□□□ -0.28
Chmp2aQ9DB34 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
Chmp2aQ9DB34 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Chmp2aQ9DB34 Gm26927-201ENSMUST00000182385 965 ntBASIC13.33□□□□□ -0.28
Chmp2aQ9DB34 AY702102-202ENSMUST00000194651 1173 ntBASIC13.33□□□□□ -0.28
Chmp2aQ9DB34 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.33□□□□□ -0.28
Chmp2aQ9DB34 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.33□□□□□ -0.28
Chmp2aQ9DB34 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.33□□□□□ -0.28
Chmp2aQ9DB34 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.33□□□□□ -0.28
Chmp2aQ9DB34 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Chmp2aQ9DB34 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp2aQ9DB34 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp2aQ9DB34 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp2aQ9DB34 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp2aQ9DB34 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp2aQ9DB34 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp2aQ9DB34 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp2aQ9DB34 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2aQ9DB34 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2aQ9DB34 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2aQ9DB34 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2aQ9DB34 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2aQ9DB34 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2aQ9DB34 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.32□□□□□ -0.28
Chmp2aQ9DB34 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2aQ9DB34 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2aQ9DB34 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2aQ9DB34 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Chmp2aQ9DB34 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Chmp2aQ9DB34 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2aQ9DB34 Gm12742-201ENSMUST00000117326 410 ntBASIC13.32□□□□□ -0.28
Chmp2aQ9DB34 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2aQ9DB34 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.32□□□□□ -0.28
Chmp2aQ9DB34 Snora78-201ENSMUST00000158630 128 ntBASIC13.32□□□□□ -0.28
Chmp2aQ9DB34 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2aQ9DB34 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2aQ9DB34 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2aQ9DB34 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.32□□□□□ -0.28
Chmp2aQ9DB34 Gm4768-201ENSMUST00000206199 686 ntBASIC13.32□□□□□ -0.28
Chmp2aQ9DB34 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.32□□□□□ -0.28
Chmp2aQ9DB34 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
Chmp2aQ9DB34 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2aQ9DB34 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2aQ9DB34 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.32□□□□□ -0.28
Chmp2aQ9DB34 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2aQ9DB34 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp2aQ9DB34 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms