Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Gm6745-201ENSMUST00000199216 526 ntBASIC15.27■□□□□ 0.04
Chmp4cQ9D7F7 Gm44069-201ENSMUST00000204898 506 ntBASIC15.27■□□□□ 0.04
Chmp4cQ9D7F7 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC15.27■□□□□ 0.04
Chmp4cQ9D7F7 Gm45384-201ENSMUST00000210451 277 ntBASIC15.27■□□□□ 0.04
Chmp4cQ9D7F7 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp4cQ9D7F7 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp4cQ9D7F7 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp4cQ9D7F7 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Chmp4cQ9D7F7 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC15.27■□□□□ 0.04
Chmp4cQ9D7F7 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp4cQ9D7F7 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp4cQ9D7F7 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp4cQ9D7F7 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp4cQ9D7F7 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp4cQ9D7F7 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp4cQ9D7F7 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp4cQ9D7F7 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC15.27■□□□□ 0.03
Chmp4cQ9D7F7 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp4cQ9D7F7 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp4cQ9D7F7 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp4cQ9D7F7 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Chmp4cQ9D7F7 Gm44292-201ENSMUST00000205194 2364 ntBASIC15.26■□□□□ 0.03
Chmp4cQ9D7F7 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC15.26■□□□□ 0.03
Chmp4cQ9D7F7 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.26■□□□□ 0.03
Chmp4cQ9D7F7 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Chmp4cQ9D7F7 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Chmp4cQ9D7F7 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC15.26■□□□□ 0.03
Chmp4cQ9D7F7 Gm8805-201ENSMUST00000117848 313 ntBASIC15.26■□□□□ 0.03
Chmp4cQ9D7F7 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp4cQ9D7F7 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp4cQ9D7F7 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp4cQ9D7F7 Gm45059-201ENSMUST00000205558 1077 ntBASIC15.26■□□□□ 0.03
Chmp4cQ9D7F7 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp4cQ9D7F7 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC15.26■□□□□ 0.03
Chmp4cQ9D7F7 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Chmp4cQ9D7F7 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp4cQ9D7F7 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Chmp4cQ9D7F7 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp4cQ9D7F7 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp4cQ9D7F7 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp4cQ9D7F7 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp4cQ9D7F7 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp4cQ9D7F7 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp4cQ9D7F7 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp4cQ9D7F7 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC15.26■□□□□ 0.03
Chmp4cQ9D7F7 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC15.26■□□□□ 0.03
Chmp4cQ9D7F7 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp4cQ9D7F7 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp4cQ9D7F7 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp4cQ9D7F7 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC15.26■□□□□ 0.03
Chmp4cQ9D7F7 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp4cQ9D7F7 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp4cQ9D7F7 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp4cQ9D7F7 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp4cQ9D7F7 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Chmp4cQ9D7F7 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp4cQ9D7F7 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp4cQ9D7F7 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp4cQ9D7F7 Gm44942-201ENSMUST00000096093 2072 ntBASIC15.25■□□□□ 0.03
Chmp4cQ9D7F7 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp4cQ9D7F7 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp4cQ9D7F7 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC15.25■□□□□ 0.03
Chmp4cQ9D7F7 Gm8463-201ENSMUST00000208573 613 ntBASIC15.25■□□□□ 0.03
Chmp4cQ9D7F7 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC15.25■□□□□ 0.03
Chmp4cQ9D7F7 Gm8598-201ENSMUST00000221184 836 ntBASIC15.25■□□□□ 0.03
Chmp4cQ9D7F7 AC150560.1-201ENSMUST00000227731 1187 ntBASIC15.25■□□□□ 0.03
Chmp4cQ9D7F7 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp4cQ9D7F7 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp4cQ9D7F7 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp4cQ9D7F7 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp4cQ9D7F7 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp4cQ9D7F7 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp4cQ9D7F7 Ptprm-203ENSMUST00000224091 3773 ntBASIC15.25■□□□□ 0.03
Chmp4cQ9D7F7 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp4cQ9D7F7 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4cQ9D7F7 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4cQ9D7F7 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4cQ9D7F7 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4cQ9D7F7 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4cQ9D7F7 Gm14608-201ENSMUST00000120030 1553 ntBASIC15.24■□□□□ 0.03
Chmp4cQ9D7F7 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Chmp4cQ9D7F7 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4cQ9D7F7 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4cQ9D7F7 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4cQ9D7F7 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4cQ9D7F7 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4cQ9D7F7 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC15.24■□□□□ 0.03
Chmp4cQ9D7F7 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4cQ9D7F7 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4cQ9D7F7 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4cQ9D7F7 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4cQ9D7F7 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Chmp4cQ9D7F7 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4cQ9D7F7 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4cQ9D7F7 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC15.24■□□□□ 0.03
Chmp4cQ9D7F7 Gm18018-201ENSMUST00000198273 408 ntBASIC15.24■□□□□ 0.03
Chmp4cQ9D7F7 Gm38671-201ENSMUST00000200573 130 ntBASIC15.24■□□□□ 0.03
Chmp4cQ9D7F7 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC15.24■□□□□ 0.03
Chmp4cQ9D7F7 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC15.24■□□□□ 0.03
Chmp4cQ9D7F7 AC154276.1-201ENSMUST00000228874 1299 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms