Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Gm6415-201ENSMUST00000118488 348 ntBASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Gm44335-201ENSMUST00000196879 141 ntBASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Gm44297-201ENSMUST00000198304 141 ntBASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Gm44346-201ENSMUST00000198851 141 ntBASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.84□□□□□ -0.35
Trim42Q9D2H5 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim42Q9D2H5 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trim42Q9D2H5 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.83□□□□□ -0.35
Trim42Q9D2H5 AC124433.1-202ENSMUST00000224762 1535 ntBASIC12.83□□□□□ -0.35
Trim42Q9D2H5 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.83□□□□□ -0.36
Trim42Q9D2H5 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trim42Q9D2H5 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim42Q9D2H5 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.83□□□□□ -0.36
Trim42Q9D2H5 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Trim42Q9D2H5 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.83□□□□□ -0.36
Trim42Q9D2H5 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.83□□□□□ -0.36
Trim42Q9D2H5 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.83□□□□□ -0.36
Trim42Q9D2H5 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim42Q9D2H5 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trim42Q9D2H5 AC132260.2-201ENSMUST00000224482 344 ntBASIC12.83□□□□□ -0.36
Trim42Q9D2H5 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trim42Q9D2H5 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim42Q9D2H5 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim42Q9D2H5 Gm5161-201ENSMUST00000075243 853 ntBASIC12.83□□□□□ -0.36
Trim42Q9D2H5 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim42Q9D2H5 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.83□□□□□ -0.36
Trim42Q9D2H5 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim42Q9D2H5 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Trim42Q9D2H5 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim42Q9D2H5 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trim42Q9D2H5 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trim42Q9D2H5 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim42Q9D2H5 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim42Q9D2H5 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Gm15693-201ENSMUST00000120470 637 ntBASIC12.82□□□□□ -0.36
Trim42Q9D2H5 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim42Q9D2H5 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms