Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Gm8396-201ENSMUST00000057361 823 ntBASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Chaf1bQ9D0N7 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chaf1bQ9D0N7 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12□□□□□ -0.49
Chaf1bQ9D0N7 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chaf1bQ9D0N7 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chaf1bQ9D0N7 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Chaf1bQ9D0N7 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Chaf1bQ9D0N7 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12□□□□□ -0.49
Chaf1bQ9D0N7 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chaf1bQ9D0N7 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chaf1bQ9D0N7 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Chaf1bQ9D0N7 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chaf1bQ9D0N7 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chaf1bQ9D0N7 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Chaf1bQ9D0N7 Gm6210-201ENSMUST00000204734 1942 ntBASIC12□□□□□ -0.49
Chaf1bQ9D0N7 Gm18263-201ENSMUST00000220846 1928 ntBASIC12□□□□□ -0.49
Chaf1bQ9D0N7 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chaf1bQ9D0N7 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Chaf1bQ9D0N7 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Chaf1bQ9D0N7 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Chaf1bQ9D0N7 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Chaf1bQ9D0N7 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12□□□□□ -0.49
Chaf1bQ9D0N7 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Chaf1bQ9D0N7 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chaf1bQ9D0N7 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12□□□□□ -0.49
Chaf1bQ9D0N7 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chaf1bQ9D0N7 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chaf1bQ9D0N7 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chaf1bQ9D0N7 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Chaf1bQ9D0N7 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Chaf1bQ9D0N7 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Chaf1bQ9D0N7 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chaf1bQ9D0N7 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Chaf1bQ9D0N7 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12□□□□□ -0.49
Chaf1bQ9D0N7 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12□□□□□ -0.49
Chaf1bQ9D0N7 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chaf1bQ9D0N7 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Chaf1bQ9D0N7 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chaf1bQ9D0N7 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Chaf1bQ9D0N7 Gm10040-201ENSMUST00000080726 1662 ntBASIC12□□□□□ -0.49
Chaf1bQ9D0N7 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Chaf1bQ9D0N7 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chaf1bQ9D0N7 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chaf1bQ9D0N7 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chaf1bQ9D0N7 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Chaf1bQ9D0N7 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.99□□□□□ -0.49
Chaf1bQ9D0N7 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chaf1bQ9D0N7 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.99□□□□□ -0.49
Chaf1bQ9D0N7 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chaf1bQ9D0N7 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.99□□□□□ -0.49
Chaf1bQ9D0N7 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chaf1bQ9D0N7 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Chaf1bQ9D0N7 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.99□□□□□ -0.49
Chaf1bQ9D0N7 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.99□□□□□ -0.49
Chaf1bQ9D0N7 Gm26464-201ENSMUST00000157094 305 ntBASIC11.99□□□□□ -0.49
Chaf1bQ9D0N7 Gm6736-201ENSMUST00000166583 948 ntBASIC11.99□□□□□ -0.49
Chaf1bQ9D0N7 Gm27702-201ENSMUST00000184512 56 ntBASIC11.99□□□□□ -0.49
Chaf1bQ9D0N7 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Chaf1bQ9D0N7 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.99□□□□□ -0.49
Chaf1bQ9D0N7 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chaf1bQ9D0N7 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chaf1bQ9D0N7 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chaf1bQ9D0N7 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chaf1bQ9D0N7 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chaf1bQ9D0N7 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chaf1bQ9D0N7 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.99□□□□□ -0.49
Chaf1bQ9D0N7 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chaf1bQ9D0N7 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Chaf1bQ9D0N7 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chaf1bQ9D0N7 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chaf1bQ9D0N7 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chaf1bQ9D0N7 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chaf1bQ9D0N7 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chaf1bQ9D0N7 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Chaf1bQ9D0N7 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chaf1bQ9D0N7 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chaf1bQ9D0N7 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms