Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Daam2-202ENSMUST00000224595 1926 ntBASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Gm43094-201ENSMUST00000196549 921 ntBASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Krt88Q9CPR6 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Krt88Q9CPR6 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Krt88Q9CPR6 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.52□□□□□ -0.56
Krt88Q9CPR6 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Krt88Q9CPR6 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Krt88Q9CPR6 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Krt88Q9CPR6 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Krt88Q9CPR6 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Krt88Q9CPR6 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Krt88Q9CPR6 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Krt88Q9CPR6 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Krt88Q9CPR6 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.52□□□□□ -0.57
Krt88Q9CPR6 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.52□□□□□ -0.57
Krt88Q9CPR6 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Krt88Q9CPR6 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.52□□□□□ -0.57
Krt88Q9CPR6 Gm4875-201ENSMUST00000118257 786 ntBASIC11.52□□□□□ -0.57
Krt88Q9CPR6 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC11.52□□□□□ -0.57
Krt88Q9CPR6 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Krt88Q9CPR6 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Krt88Q9CPR6 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Krt88Q9CPR6 Gm22175-201ENSMUST00000175007 78 ntBASIC11.52□□□□□ -0.57
Krt88Q9CPR6 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Krt88Q9CPR6 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC11.52□□□□□ -0.57
Krt88Q9CPR6 Gm19184-201ENSMUST00000196798 928 ntBASIC11.52□□□□□ -0.57
Krt88Q9CPR6 Gm42550-201ENSMUST00000201553 960 ntBASIC11.52□□□□□ -0.57
Krt88Q9CPR6 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.52□□□□□ -0.57
Krt88Q9CPR6 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.52□□□□□ -0.57
Krt88Q9CPR6 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.52□□□□□ -0.57
Krt88Q9CPR6 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Krt88Q9CPR6 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Krt88Q9CPR6 AC154767.3-201ENSMUST00000225150 1342 ntBASIC11.52□□□□□ -0.57
Krt88Q9CPR6 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Krt88Q9CPR6 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.52□□□□□ -0.57
Krt88Q9CPR6 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.52□□□□□ -0.57
Krt88Q9CPR6 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Krt88Q9CPR6 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Krt88Q9CPR6 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Krt88Q9CPR6 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.52□□□□□ -0.57
Krt88Q9CPR6 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Krt88Q9CPR6 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Krt88Q9CPR6 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Krt88Q9CPR6 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Krt88Q9CPR6 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Krt88Q9CPR6 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.51□□□□□ -0.57
Krt88Q9CPR6 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC11.51□□□□□ -0.57
Krt88Q9CPR6 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.51□□□□□ -0.57
Krt88Q9CPR6 Gm11524-201ENSMUST00000119349 807 ntBASIC11.51□□□□□ -0.57
Krt88Q9CPR6 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Krt88Q9CPR6 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms