Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.46□□□□□ -0.41
Msh4Q99MT2 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
Msh4Q99MT2 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msh4Q99MT2 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msh4Q99MT2 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msh4Q99MT2 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msh4Q99MT2 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msh4Q99MT2 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Msh4Q99MT2 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msh4Q99MT2 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msh4Q99MT2 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msh4Q99MT2 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.46□□□□□ -0.41
Msh4Q99MT2 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Msh4Q99MT2 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.46□□□□□ -0.41
Msh4Q99MT2 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.46□□□□□ -0.41
Msh4Q99MT2 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.46□□□□□ -0.41
Msh4Q99MT2 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msh4Q99MT2 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msh4Q99MT2 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Msh4Q99MT2 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.46□□□□□ -0.42
Msh4Q99MT2 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Msh4Q99MT2 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.46□□□□□ -0.42
Msh4Q99MT2 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Msh4Q99MT2 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.46□□□□□ -0.42
Msh4Q99MT2 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
Msh4Q99MT2 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Msh4Q99MT2 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.46□□□□□ -0.42
Msh4Q99MT2 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Msh4Q99MT2 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Msh4Q99MT2 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.46□□□□□ -0.42
Msh4Q99MT2 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Msh4Q99MT2 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Msh4Q99MT2 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Msh4Q99MT2 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Msh4Q99MT2 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Msh4Q99MT2 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.45□□□□□ -0.42
Msh4Q99MT2 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msh4Q99MT2 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Msh4Q99MT2 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Msh4Q99MT2 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msh4Q99MT2 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Msh4Q99MT2 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msh4Q99MT2 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msh4Q99MT2 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.45□□□□□ -0.42
Msh4Q99MT2 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Msh4Q99MT2 Snora78-201ENSMUST00000158630 128 ntBASIC12.45□□□□□ -0.42
Msh4Q99MT2 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Msh4Q99MT2 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Msh4Q99MT2 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.45□□□□□ -0.42
Msh4Q99MT2 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.45□□□□□ -0.42
Msh4Q99MT2 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Msh4Q99MT2 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.45□□□□□ -0.42
Msh4Q99MT2 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Msh4Q99MT2 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.45□□□□□ -0.42
Msh4Q99MT2 Gm37497-201ENSMUST00000195830 798 ntBASIC12.45□□□□□ -0.42
Msh4Q99MT2 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.45□□□□□ -0.42
Msh4Q99MT2 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.45□□□□□ -0.42
Msh4Q99MT2 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
Msh4Q99MT2 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.45□□□□□ -0.42
Msh4Q99MT2 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msh4Q99MT2 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Msh4Q99MT2 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Msh4Q99MT2 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.45□□□□□ -0.42
Msh4Q99MT2 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msh4Q99MT2 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msh4Q99MT2 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Msh4Q99MT2 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Msh4Q99MT2 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msh4Q99MT2 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msh4Q99MT2 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msh4Q99MT2 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msh4Q99MT2 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Msh4Q99MT2 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.45□□□□□ -0.42
Msh4Q99MT2 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.45□□□□□ -0.42
Msh4Q99MT2 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msh4Q99MT2 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Msh4Q99MT2 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msh4Q99MT2 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Msh4Q99MT2 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Msh4Q99MT2 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Msh4Q99MT2 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Msh4Q99MT2 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Msh4Q99MT2 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Msh4Q99MT2 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Msh4Q99MT2 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Msh4Q99MT2 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Msh4Q99MT2 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Msh4Q99MT2 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Msh4Q99MT2 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Msh4Q99MT2 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.44□□□□□ -0.42
Msh4Q99MT2 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Msh4Q99MT2 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Msh4Q99MT2 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Msh4Q99MT2 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Msh4Q99MT2 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.44□□□□□ -0.42
Msh4Q99MT2 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.44□□□□□ -0.42
Msh4Q99MT2 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Msh4Q99MT2 Gm12742-201ENSMUST00000117326 410 ntBASIC12.44□□□□□ -0.42
Msh4Q99MT2 Gm12957-201ENSMUST00000117835 377 ntBASIC12.44□□□□□ -0.42
Msh4Q99MT2 Gm12384-201ENSMUST00000119228 919 ntBASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms