Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Gm13813-201ENSMUST00000120998 787 ntBASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Gm10156-201ENSMUST00000122364 462 ntBASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Gm23984-201ENSMUST00000157139 203 ntBASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Proscos-202ENSMUST00000178990 666 ntBASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.36□□□□□ -0.43
Cstf3Q99LI7 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.36□□□□□ -0.43
Cstf3Q99LI7 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cstf3Q99LI7 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cstf3Q99LI7 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cstf3Q99LI7 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cstf3Q99LI7 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cstf3Q99LI7 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Cstf3Q99LI7 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cstf3Q99LI7 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cstf3Q99LI7 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.35□□□□□ -0.43
Cstf3Q99LI7 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cstf3Q99LI7 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cstf3Q99LI7 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cstf3Q99LI7 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cstf3Q99LI7 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Cstf3Q99LI7 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cstf3Q99LI7 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Cstf3Q99LI7 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cstf3Q99LI7 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cstf3Q99LI7 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Cstf3Q99LI7 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.35□□□□□ -0.43
Cstf3Q99LI7 Gm11918-201ENSMUST00000121660 179 ntBASIC12.35□□□□□ -0.43
Cstf3Q99LI7 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cstf3Q99LI7 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.35□□□□□ -0.43
Cstf3Q99LI7 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cstf3Q99LI7 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.35□□□□□ -0.43
Cstf3Q99LI7 Gm45384-201ENSMUST00000210451 277 ntBASIC12.35□□□□□ -0.43
Cstf3Q99LI7 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cstf3Q99LI7 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Cstf3Q99LI7 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Cstf3Q99LI7 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cstf3Q99LI7 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.35□□□□□ -0.43
Cstf3Q99LI7 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cstf3Q99LI7 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cstf3Q99LI7 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cstf3Q99LI7 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cstf3Q99LI7 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cstf3Q99LI7 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cstf3Q99LI7 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.35□□□□□ -0.43
Cstf3Q99LI7 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.35□□□□□ -0.43
Cstf3Q99LI7 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cstf3Q99LI7 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Gm14928-201ENSMUST00000120198 477 ntBASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Gm13123-201ENSMUST00000122173 492 ntBASIC12.34□□□□□ -0.43
Cstf3Q99LI7 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.34□□□□□ -0.43
Cstf3Q99LI7 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms