Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Gm12314-201ENSMUST00000118104 538 ntBASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Gm7003-201ENSMUST00000195089 312 ntBASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Gm19187-201ENSMUST00000206781 892 ntBASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Gm18730-201ENSMUST00000218038 343 ntBASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd2Q99JR8 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd2Q99JR8 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Smarcd2Q99JR8 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.87□□□□□ -0.35
Smarcd2Q99JR8 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.87□□□□□ -0.35
Smarcd2Q99JR8 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd2Q99JR8 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd2Q99JR8 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.87□□□□□ -0.35
Smarcd2Q99JR8 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd2Q99JR8 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd2Q99JR8 Gm12266-201ENSMUST00000120311 962 ntBASIC12.87□□□□□ -0.35
Smarcd2Q99JR8 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd2Q99JR8 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.87□□□□□ -0.35
Smarcd2Q99JR8 Gm27552-201ENSMUST00000183351 62 ntBASIC12.87□□□□□ -0.35
Smarcd2Q99JR8 Gm27844-201ENSMUST00000183613 62 ntBASIC12.87□□□□□ -0.35
Smarcd2Q99JR8 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Smarcd2Q99JR8 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd2Q99JR8 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd2Q99JR8 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd2Q99JR8 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd2Q99JR8 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd2Q99JR8 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Smarcd2Q99JR8 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd2Q99JR8 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd2Q99JR8 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd2Q99JR8 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd2Q99JR8 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd2Q99JR8 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.87□□□□□ -0.35
Smarcd2Q99JR8 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd2Q99JR8 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd2Q99JR8 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd2Q99JR8 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd2Q99JR8 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Smarcd2Q99JR8 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd2Q99JR8 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd2Q99JR8 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Smarcd2Q99JR8 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd2Q99JR8 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd2Q99JR8 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Smarcd2Q99JR8 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd2Q99JR8 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd2Q99JR8 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd2Q99JR8 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd2Q99JR8 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd2Q99JR8 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd2Q99JR8 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd2Q99JR8 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd2Q99JR8 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd2Q99JR8 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd2Q99JR8 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.86□□□□□ -0.35
Smarcd2Q99JR8 Gm11597-201ENSMUST00000121423 964 ntBASIC12.86□□□□□ -0.35
Smarcd2Q99JR8 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.86□□□□□ -0.35
Smarcd2Q99JR8 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Smarcd2Q99JR8 Gm22334-201ENSMUST00000158070 133 ntBASIC12.86□□□□□ -0.35
Smarcd2Q99JR8 Gm17040-202ENSMUST00000170597 889 ntBASIC12.86□□□□□ -0.35
Smarcd2Q99JR8 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms