Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Pcdhb20Q91XZ9 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 C130083A15Rik-201ENSMUST00000205707 1460 ntBASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Gm8652-201ENSMUST00000181363 964 ntBASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Gm18800-202ENSMUST00000188688 1105 ntBASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Gm42733-201ENSMUST00000201272 519 ntBASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Gm6841-201ENSMUST00000220602 598 ntBASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 AC123062.1-201ENSMUST00000221287 481 ntBASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Gm10145-201ENSMUST00000077776 462 ntBASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Gm10705-201ENSMUST00000098980 461 ntBASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb20Q91XZ9 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Gm7416-201ENSMUST00000117448 1487 ntBASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms