Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga4Q91XY4 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pcdhga4Q91XY4 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.62□□□□□ -0.39
Pcdhga4Q91XY4 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga4Q91XY4 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga4Q91XY4 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga4Q91XY4 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga4Q91XY4 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga4Q91XY4 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.62□□□□□ -0.39
Pcdhga4Q91XY4 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga4Q91XY4 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga4Q91XY4 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga4Q91XY4 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 Mir1938-201ENSMUST00000158746 100 ntBASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 Mir7221-201ENSMUST00000184009 72 ntBASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 Gm5370-201ENSMUST00000187187 574 ntBASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 Gm9899-201ENSMUST00000065519 555 ntBASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhga4Q91XY4 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Gm1335-201ENSMUST00000121653 386 ntBASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms