Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdhr1Q8VHP6 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdhr1Q8VHP6 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Cdhr1Q8VHP6 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.56□□□□□ -0.4
Cdhr1Q8VHP6 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.56□□□□□ -0.4
Cdhr1Q8VHP6 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.56□□□□□ -0.4
Cdhr1Q8VHP6 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.56□□□□□ -0.4
Cdhr1Q8VHP6 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.56□□□□□ -0.4
Cdhr1Q8VHP6 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.56□□□□□ -0.4
Cdhr1Q8VHP6 Gm5904-201ENSMUST00000210286 865 ntBASIC12.56□□□□□ -0.4
Cdhr1Q8VHP6 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.56□□□□□ -0.4
Cdhr1Q8VHP6 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.56□□□□□ -0.4
Cdhr1Q8VHP6 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdhr1Q8VHP6 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.56□□□□□ -0.4
Cdhr1Q8VHP6 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdhr1Q8VHP6 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdhr1Q8VHP6 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdhr1Q8VHP6 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdhr1Q8VHP6 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdhr1Q8VHP6 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdhr1Q8VHP6 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdhr1Q8VHP6 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdhr1Q8VHP6 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdhr1Q8VHP6 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cdhr1Q8VHP6 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdhr1Q8VHP6 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdhr1Q8VHP6 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdhr1Q8VHP6 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdhr1Q8VHP6 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdhr1Q8VHP6 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdhr1Q8VHP6 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdhr1Q8VHP6 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Cdhr1Q8VHP6 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdhr1Q8VHP6 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Cdhr1Q8VHP6 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdhr1Q8VHP6 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.55□□□□□ -0.4
Cdhr1Q8VHP6 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdhr1Q8VHP6 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdhr1Q8VHP6 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdhr1Q8VHP6 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cdhr1Q8VHP6 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdhr1Q8VHP6 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdhr1Q8VHP6 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdhr1Q8VHP6 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdhr1Q8VHP6 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.55□□□□□ -0.4
Cdhr1Q8VHP6 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.55□□□□□ -0.4
Cdhr1Q8VHP6 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdhr1Q8VHP6 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cdhr1Q8VHP6 Gm15236-201ENSMUST00000117309 379 ntBASIC12.55□□□□□ -0.4
Cdhr1Q8VHP6 Gm11222-201ENSMUST00000119005 738 ntBASIC12.55□□□□□ -0.4
Cdhr1Q8VHP6 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.55□□□□□ -0.4
Cdhr1Q8VHP6 Gm6082-201ENSMUST00000215204 454 ntBASIC12.55□□□□□ -0.4
Cdhr1Q8VHP6 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.55□□□□□ -0.4
Cdhr1Q8VHP6 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.55□□□□□ -0.4
Cdhr1Q8VHP6 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdhr1Q8VHP6 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cdhr1Q8VHP6 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdhr1Q8VHP6 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Cdhr1Q8VHP6 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdhr1Q8VHP6 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.55□□□□□ -0.4
Cdhr1Q8VHP6 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdhr1Q8VHP6 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdhr1Q8VHP6 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdhr1Q8VHP6 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdhr1Q8VHP6 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdhr1Q8VHP6 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdhr1Q8VHP6 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdhr1Q8VHP6 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdhr1Q8VHP6 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdhr1Q8VHP6 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.54□□□□□ -0.4
Cdhr1Q8VHP6 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdhr1Q8VHP6 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdhr1Q8VHP6 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cdhr1Q8VHP6 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdhr1Q8VHP6 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cdhr1Q8VHP6 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdhr1Q8VHP6 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdhr1Q8VHP6 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdhr1Q8VHP6 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdhr1Q8VHP6 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
Cdhr1Q8VHP6 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.54□□□□□ -0.4
Cdhr1Q8VHP6 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdhr1Q8VHP6 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdhr1Q8VHP6 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cdhr1Q8VHP6 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdhr1Q8VHP6 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdhr1Q8VHP6 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.54□□□□□ -0.4
Cdhr1Q8VHP6 Gm23363-201ENSMUST00000175024 79 ntBASIC12.54□□□□□ -0.4
Cdhr1Q8VHP6 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.54□□□□□ -0.4
Cdhr1Q8VHP6 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.54□□□□□ -0.4
Cdhr1Q8VHP6 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdhr1Q8VHP6 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.54□□□□□ -0.4
Cdhr1Q8VHP6 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.54□□□□□ -0.4
Cdhr1Q8VHP6 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdhr1Q8VHP6 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdhr1Q8VHP6 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cdhr1Q8VHP6 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdhr1Q8VHP6 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cdhr1Q8VHP6 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdhr1Q8VHP6 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms